WormBase Tree Display for Gene: WBGene00017691
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| WBGene00017691 | SMap | S_parent | Sequence | F22A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ilys-5 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F22A3.6 | ||||||||
| Molecular_name | F22A3.6a | ||||||||
| F22A3.6a.1 | |||||||||
| CE04442 | |||||||||
| F22A3.6c | |||||||||
| CE50459 | |||||||||
| F22A3.6b | |||||||||
| F22A3.6c.1 | |||||||||
| Other_name | CELE_F22A3.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ilys-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | ilys-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ilys | ||||||||
| Allele (55) | |||||||||
| Strain | WBStrain00004741 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001678 | ||||||||
| 00001679 | |||||||||
| 00001680 | |||||||||
| 00001681 | |||||||||
| 00001682 | |||||||||
| 00001683 | |||||||||
| 00001684 | |||||||||
| 00001685 | |||||||||
| 00001686 | |||||||||
| 00123015 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00016668 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016669 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016670 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016958 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020982 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable lysozyme activity. Predicted to be involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22A3.6a | |||||||
| F22A3.6c | |||||||||
| Corresponding_CDS_history | F22A3.6b:wp246 | ||||||||
| Corresponding_transcript | F22A3.6b | ||||||||
| F22A3.6a.1 | |||||||||
| F22A3.6c.1 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature | WBsf237492 | ||||||||
| WBsf237493 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045267 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031248 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001331 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13078 | ||||||||
| Expr1026775 | |||||||||
| Expr1149196 | |||||||||
| Expr2012723 | |||||||||
| Expr2030960 | |||||||||
| Drives_construct | WBCnstr00038572 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (369) | |||||||||
| Interaction | WBInteraction000295188 | ||||||||
| WBInteraction000422645 | |||||||||
| WBInteraction000578084 | |||||||||
| Map_info | Map | X | Position | -2.79796 | Error | 0.007521 | |||
| Positive | Positive_clone | F22A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031802 | ||||||||
| WBPaper00033984 | |||||||||
| WBPaper00040135 | |||||||||
| WBPaper00064841 | |||||||||
| WBPaper00065988 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
