WormBase Tree Display for Gene: WBGene00016958

WBGene00016958 SMap: S_parent: Sequence: C55F2
  Identity: Version: 2
    Name: CGC_name: ilys-4 Person_evidence: WBPerson2531
      Sequence_name: C55F2.2
      Molecular_name: C55F2.2
        C55F2.2.1
        CE31458
        C55F2.2.2
      Other_name: CELE_C55F2.2 Accession_evidence: NDB BX284604
      Public_name: ilys-4
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: ilys-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ilys
    Allele (19)
    Strain: WBStrain00047432
      WBStrain00047551
    RNASeq_FPKM (74)
    GO_annotation: 00092861
      00092862
      00092863
      00092864
      00092865
      00092866
      00092867
      00122462
    Ortholog: WBGene00037258 Caenorhabditis briggsae Person_evidence: WBPerson2531
          From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00128659 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223222 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11427 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3438 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6055 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5612 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7254 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g14735 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g234 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g916 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6582 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-ilys-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00067.g3183 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19202 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014824 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03185 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15968 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g10948 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241178 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00277605 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267350 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0034162 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0025827 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
    Paralog: WBGene00016668 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016669 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016670 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017691 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020982 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lysozyme activity. Predicted to be involved in defense response to bacterium and killing of cells of another organism. Expressed in DD neuron and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C55F2.2
    Corresponding_CDS_history: C55F2.2:wp82
    Corresponding_transcript: C55F2.2.1
      C55F2.2.2
    Other_sequence (32)
    Associated_feature: WBsf651962
      WBsf230347
  Experimental_info: RNAi_result: WBRNAi00043248 Inferred_automatically: RNAi_primary
      WBRNAi00012444 Inferred_automatically: RNAi_primary
      WBRNAi00070755 Inferred_automatically: RNAi_primary
      WBRNAi00002195 Inferred_automatically: RNAi_primary
      WBRNAi00097919 Inferred_automatically: RNAi_primary
      WBRNAi00043247 Inferred_automatically: RNAi_primary
      WBRNAi00070757 Inferred_automatically: RNAi_primary
      WBRNAi00070756 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10604
      Expr13077
      Expr1010634
      Expr1037274
      Expr1147228
      Expr2012722
      Expr2030959
    Drives_construct: WBCnstr00017034
      WBCnstr00027679
      WBCnstr00038571
    Construct_product: WBCnstr00027679
    Microarray_results (16)
    Expression_cluster (185)
    Interaction: WBInteraction000007986
      WBInteraction000007987
  Map_info: Map: IV Position: 3.49561 Error: 0.000241
    Positive: Positive_clone: C55F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031802
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene