WormBase Tree Display for Gene: WBGene00015389

WBGene00015389 SMap: S_parent: Sequence: C03F11
  Identity: Version: 2
    Name: CGC_name: scav-1
      Sequence_name: C03F11.3
      Molecular_name: C03F11.3
        C03F11.3.1
        CE37606
      Other_name: CELE_C03F11.3 Accession_evidence: NDB BX284606
      Public_name: scav-1
    DB_info: Database: AceView gene XG16
        WormQTL gene WBGene00015389
        WormFlux gene WBGene00015389
        NDB locus_tag CELE_C03F11.3
        Panther gene CAEEL|WormBase=WBGene00015389|UniProtKB=Q11124
          family PTHR11923
        NCBI gene 180812
        RefSeq protein NM_076518.7
        SwissProt UniProtAcc Q11124
        UniProt_GCRP UniProtAcc Q11124
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Mar 2010 11:14:55 WBPerson2970 Name_change: CGC_name: scav-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scav
    Allele (48)
    Strain: WBStrain00037026
    RNASeq_FPKM (74)
    GO_annotation: 00057280
      00057281
      00057282
      00057283
      00057284
      00121289
    Ortholog (34)
    Paralog: WBGene00008542 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008692 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011076 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013039 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013578 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable scavenger receptor activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Is an ortholog of human SCARB1 (scavenger receptor class B member 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C03F11.3
    Corresponding_CDS_history: C03F11.3:wp133
    Corresponding_transcript: C03F11.3.1
    Other_sequence (17)
    Associated_feature: WBsf653975
      WBsf979087
      WBsf1005257
      WBsf237372
      WBsf237373
  Experimental_info: RNAi_result: WBRNAi00028396 Inferred_automatically: RNAi_primary
      WBRNAi00078833 Inferred_automatically: RNAi_primary
      WBRNAi00039531 Inferred_automatically: RNAi_primary
      WBRNAi00010059 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021528
      Expr1036588
      Expr1143631
      Expr2015614
      Expr2033849
    Drives_construct: WBCnstr00028883
    Construct_product: WBCnstr00028883
    Microarray_results (17)
    Expression_cluster (145)
    Interaction: WBInteraction000171409
      WBInteraction000204284
      WBInteraction000305782
      WBInteraction000409092
    WBProcess: WBbiopr:00000039
  Map_info: Map: X Position: -5.36753 Error: 0.014966
    Positive: Positive_clone: C03F11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00010266
    WBPaper00018248
    WBPaper00018249
    WBPaper00032930
    WBPaper00037997
    WBPaper00038491
    WBPaper00041771
    WBPaper00055090
    WBPaper00065146
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene