WormBase Tree Display for Gene: WBGene00008692

WBGene00008692 SMap: S_parent: Sequence: F11C1
  Identity: Version: 2
    Name: CGC_name: scav-4
      Sequence_name: F11C1.3
      Molecular_name: F11C1.3
        F11C1.3.1
        CE33994
      Other_name: CELE_F11C1.3 Accession_evidence: NDB BX284606
      Public_name: scav-4
    DB_info: Database: AceView gene XN603
        WormQTL gene WBGene00008692
        WormFlux gene WBGene00008692
        NDB locus_tag CELE_F11C1.3
        Panther gene CAEEL|WormBase=WBGene00008692|UniProtKB=Q19344
          family PTHR11923
        NCBI gene 181429
        RefSeq protein NM_077756.6
        TrEMBL UniProtAcc Q19344
        UniProt_GCRP UniProtAcc Q19344
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Mar 2010 11:14:55 WBPerson2970 Name_change: CGC_name: scav-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scav
    Allele (62)
    RNASeq_FPKM (74)
    GO_annotation: 00064486
      00064487
      00064488
      00064489
      00116570
    Ortholog (40)
    Paralog: WBGene00008542 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015389 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013039 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013578 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011076 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable scavenger receptor activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Is an ortholog of human SCARB1 (scavenger receptor class B member 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F11C1.3
    Corresponding_CDS_history: F11C1.3:wp101
    Corresponding_transcript: F11C1.3.1
    Other_sequence (14)
    Associated_feature: WBsf648633
      WBsf1007485
      WBsf1024162
      WBsf236524
      WBsf236525
  Experimental_info: RNAi_result: WBRNAi00030816 Inferred_automatically: RNAi_primary
      WBRNAi00013115 Inferred_automatically: RNAi_primary
      WBRNAi00088587 Inferred_automatically: RNAi_primary
      WBRNAi00078836 Inferred_automatically: RNAi_primary
      WBRNAi00044362 Inferred_automatically: RNAi_primary
      WBRNAi00088694 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013279
      Expr1033788
      Expr1148303
      Expr2015617
      Expr2033852
    Drives_construct: WBCnstr00032765
    Construct_product: WBCnstr00032765
    Microarray_results (21)
    Expression_cluster (189)
    Interaction: WBInteraction000341561
      WBInteraction000580608
  Map_info: Map: X Position: 9.28466
    Positive: Positive_clone: F11C1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00010266
    WBPaper00018248
    WBPaper00018249
    WBPaper00032930
    WBPaper00038491
    WBPaper00055090
    WBPaper00061938
    WBPaper00064898
    WBPaper00065146
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene