WormBase Tree Display for Gene: WBGene00001984
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| WBGene00001984 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Person_evidence | WBPerson83 | ||||||||
| SMap | S_parent | Sequence | W06B11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | hog-1 | Person_evidence | WBPerson83 | |||||
| Sequence_name | W06B11.4 | ||||||||
| Molecular_name | W06B11.4a | ||||||||
| W06B11.4a.1 | |||||||||
| CE35048 | |||||||||
| W06B11.4b | |||||||||
| CE45588 | |||||||||
| W06B11.4b.1 | |||||||||
| Other_name | CELE_W06B11.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hog-1 | ||||||||
| DB_info | Database | AceView | gene | XG466 | |||||
| WormQTL | gene | WBGene00001984 | |||||||
| WormFlux | gene | WBGene00001984 | |||||||
| NDB | locus_tag | CELE_W06B11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001984|UniProtKB=H2KZR5 | |||||||
| family | PTHR46706 | ||||||||
| NCBI | gene | 180851 | |||||||
| RefSeq | protein | NM_001270100.3 | |||||||
| NM_001270099.3 | |||||||||
| TrEMBL | UniProtAcc | Q23193 | |||||||
| H2KZR5 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZR5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hog | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00032682 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022508 | ||||||||
| 00109838 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (24) | |||||||||
| Structured_description | Concise_description | hog-1 encodes a hedgehog-like protein, with a solitary Hint/Hog domain;the function of HOG-1's isolated Hint/Hog domain is unknown; in proteinswhere they coexist with other, N-terminal, domains, the Hint/Hog domainis predicted to cut its host protein into two halves and then covalentlylink cholesterol to the C-terminus of the N-terminal domain; HOG-1 isweakly required for normal molting; HOG-1 is also required for normaladult alae formation, growth to full size, cuticle adhesion, andlocomotion; all of these requirements may reflect common defects incholesterol-dependent hedgehog-like signalling or in vesicletrafficking. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in protein autoprocessing. Predicted to be located in extracellular region. Expressed in rectal epithelium. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W06B11.4a | |||||||
| W06B11.4b | |||||||||
| Corresponding_CDS_history | W06B11.4:wp105 | ||||||||
| Corresponding_transcript | W06B11.4a.1 | ||||||||
| W06B11.4b.1 | |||||||||
| Other_sequence | CJC07554_1 | ||||||||
| Associated_feature | WBsf654025 | ||||||||
| WBsf655665 | |||||||||
| WBsf670563 | |||||||||
| WBsf1005412 | |||||||||
| WBsf1005413 | |||||||||
| WBsf1023025 | |||||||||
| WBsf1023026 | |||||||||
| WBsf237412 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00077028 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076979 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019649 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077006 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036329 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054865 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4427 | ||||||||
| Expr1017173 | |||||||||
| Expr1031153 | |||||||||
| Expr1158410 | |||||||||
| Expr2012535 | |||||||||
| Expr2030774 | |||||||||
| Drives_construct | WBCnstr00011989 | ||||||||
| WBCnstr00036541 | |||||||||
| Construct_product | WBCnstr00016294 | ||||||||
| WBCnstr00036541 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (193) | |||||||||
| Interaction (37) | |||||||||
| WBProcess | WBbiopr:00000123 | ||||||||
| Map_info | Map | X | Position | -4.18891 | Error | 0.009628 | |||
| Positive | Positive_clone | W06B11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002823 | ||||||||
| WBPaper00003717 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| WBPaper00028754 | |||||||||
| WBPaper00064105 | |||||||||
| WBPaper00064957 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
