WormBase Tree Display for Gene: WBGene00001984
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WBGene00001984 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
---|---|---|---|---|---|---|---|---|---|
Person_evidence | WBPerson83 | ||||||||
SMap | S_parent | Sequence | W06B11 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | hog-1 | Person_evidence | WBPerson83 | |||||
Sequence_name | W06B11.4 | ||||||||
Molecular_name | W06B11.4a | ||||||||
W06B11.4a.1 | |||||||||
CE35048 | |||||||||
W06B11.4b | |||||||||
CE45588 | |||||||||
W06B11.4b.1 | |||||||||
Other_name | CELE_W06B11.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | hog-1 | ||||||||
DB_info | Database | AceView | gene | XG466 | |||||
WormQTL | gene | WBGene00001984 | |||||||
WormFlux | gene | WBGene00001984 | |||||||
NDB | locus_tag | CELE_W06B11.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001984|UniProtKB=H2KZR5 | |||||||
family | PTHR46706 | ||||||||
NCBI | gene | 180851 | |||||||
RefSeq | protein | NM_001270100.3 | |||||||
NM_001270099.3 | |||||||||
TrEMBL | UniProtAcc | Q23193 | |||||||
H2KZR5 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZR5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hog | ||||||||
Allele (34) | |||||||||
Strain | WBStrain00032682 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022508 | ||||||||
00109838 | |||||||||
Ortholog (22) | |||||||||
Paralog (24) | |||||||||
Structured_description | Concise_description | hog-1 encodes a hedgehog-like protein, with a solitary Hint/Hog domain;the function of HOG-1's isolated Hint/Hog domain is unknown; in proteinswhere they coexist with other, N-terminal, domains, the Hint/Hog domainis predicted to cut its host protein into two halves and then covalentlylink cholesterol to the C-terminus of the N-terminal domain; HOG-1 isweakly required for normal molting; HOG-1 is also required for normaladult alae formation, growth to full size, cuticle adhesion, andlocomotion; all of these requirements may reflect common defects incholesterol-dependent hedgehog-like signalling or in vesicletrafficking. | Paper_evidence | WBPaper00003717 | |||||
WBPaper00026841 | |||||||||
WBPaper00027263 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
Automated_description | Predicted to be involved in protein autoprocessing. Predicted to be located in extracellular region. Expressed in rectal epithelium. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W06B11.4a | |||||||
W06B11.4b | |||||||||
Corresponding_CDS_history | W06B11.4:wp105 | ||||||||
Corresponding_transcript | W06B11.4a.1 | ||||||||
W06B11.4b.1 | |||||||||
Other_sequence | CJC07554_1 | ||||||||
Associated_feature | WBsf654025 | ||||||||
WBsf655665 | |||||||||
WBsf670563 | |||||||||
WBsf1005412 | |||||||||
WBsf1005413 | |||||||||
WBsf1023025 | |||||||||
WBsf1023026 | |||||||||
WBsf237412 | |||||||||
Experimental_info | RNAi_result | WBRNAi00077028 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076979 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019649 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077006 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036329 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054865 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4427 | ||||||||
Expr1017173 | |||||||||
Expr1031153 | |||||||||
Expr1158410 | |||||||||
Expr2012535 | |||||||||
Expr2030774 | |||||||||
Drives_construct | WBCnstr00011989 | ||||||||
WBCnstr00036541 | |||||||||
Construct_product | WBCnstr00016294 | ||||||||
WBCnstr00036541 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (193) | |||||||||
Interaction | WBInteraction000114604 | ||||||||
WBInteraction000114605 | |||||||||
WBInteraction000114610 | |||||||||
WBInteraction000145431 | |||||||||
WBInteraction000173621 | |||||||||
WBInteraction000196192 | |||||||||
WBInteraction000208560 | |||||||||
WBInteraction000238555 | |||||||||
WBInteraction000256923 | |||||||||
WBInteraction000257222 | |||||||||
WBInteraction000262073 | |||||||||
WBInteraction000267856 | |||||||||
WBInteraction000268302 | |||||||||
WBInteraction000268960 | |||||||||
WBInteraction000276662 | |||||||||
WBInteraction000278072 | |||||||||
WBInteraction000299457 | |||||||||
WBInteraction000311584 | |||||||||
WBInteraction000315826 | |||||||||
WBInteraction000318961 | |||||||||
WBInteraction000328617 | |||||||||
WBInteraction000334307 | |||||||||
WBInteraction000335766 | |||||||||
WBInteraction000337055 | |||||||||
WBInteraction000349091 | |||||||||
WBInteraction000350204 | |||||||||
WBInteraction000350410 | |||||||||
WBInteraction000352969 | |||||||||
WBInteraction000357833 | |||||||||
WBInteraction000377135 | |||||||||
WBInteraction000382198 | |||||||||
WBInteraction000393353 | |||||||||
WBInteraction000398403 | |||||||||
WBInteraction000411138 | |||||||||
WBInteraction000411671 | |||||||||
WBInteraction000422846 | |||||||||
WBInteraction000430129 | |||||||||
WBProcess | WBbiopr:00000123 | ||||||||
Map_info | Map | X | Position | -4.18891 | Error | 0.009628 | |||
Positive | Positive_clone | W06B11 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00002823 | ||||||||
WBPaper00003717 | |||||||||
WBPaper00026841 | |||||||||
WBPaper00027263 | |||||||||
WBPaper00028754 | |||||||||
WBPaper00064105 | |||||||||
WBPaper00064957 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |