WormBase Tree Display for Gene: WBGene00017184
expand all nodes | collapse all nodes | view schema
| WBGene00017184 | SMap | S_parent | Sequence | F02G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ncam-1 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | F02G3.1 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_F02G3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ncam-1 | ||||||||
| DB_info | Database | AceView | gene | XB321 | |||||
| WormQTL | gene | WBGene00017184 | |||||||
| WormFlux | gene | WBGene00017184 | |||||||
| NDB | locus_tag | CELE_F02G3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017184|UniProtKB=Q8MQ86 | |||||||
| family | PTHR10075 | ||||||||
| NCBI | gene | 180418 | |||||||
| RefSeq | protein | NM_171616.5 | |||||||
| NM_171615.7 | |||||||||
| NM_171617.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF318234 | |||||||
| TrEMBL | UniProtAcc | Q19128 | |||||||
| Q8MQ86 | |||||||||
| Q8T3E5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQ86 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2005 16:28:46 | WBPerson2970 | Name_change | CGC_name | ncam-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncam | ||||||||
| Allele (166) | |||||||||
| Possibly_affected_by | WBVar02153246 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063556 | ||||||||
| 00063557 | |||||||||
| 00063558 | |||||||||
| 00063559 | |||||||||
| 00063560 | |||||||||
| 00063561 | |||||||||
| 00063562 | |||||||||
| 00063563 | |||||||||
| 00122639 | |||||||||
| 00122640 | |||||||||
| Ortholog (40) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in axon and plasma membrane. Expressed in several structures, including GLR; germ line; neurons; somatic nervous system; and spermatheca. Human ortholog(s) of this gene implicated in several diseases, including brain glioblastoma multiforme; carcinoma (multiple); and insulinoma. Is an ortholog of human NCAM1 (neural cell adhesion molecule 1) and NCAM2 (neural cell adhesion molecule 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (12) | ||||||||
| Molecular_info | Corresponding_CDS | F02G3.1a | |||||||
| F02G3.1b | |||||||||
| F02G3.1c | |||||||||
| Corresponding_transcript | F02G3.1a.1 | ||||||||
| F02G3.1a.2 | |||||||||
| F02G3.1a.3 | |||||||||
| F02G3.1b.1 | |||||||||
| F02G3.1c.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (20) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043832 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012789 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1764 | ||||||||
| Expr8843 | |||||||||
| Expr8844 | |||||||||
| Expr15189 | |||||||||
| Expr1023070 | |||||||||
| Expr1037389 | |||||||||
| Expr1147808 | |||||||||
| Expr2013901 | |||||||||
| Expr2032141 | |||||||||
| Drives_construct | WBCnstr00000363 | ||||||||
| WBCnstr00013553 | |||||||||
| WBCnstr00013554 | |||||||||
| WBCnstr00027499 | |||||||||
| Construct_product | WBCnstr00027499 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (269) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | X | Position | -19.5097 | |||||
| Positive | Positive_clone | F02G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00047944 | |||||||||
| WBPaper00052557 | |||||||||
| WBPaper00052569 | |||||||||
| WBPaper00053600 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058323 | |||||||||
| WBPaper00059984 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
