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WormBase Tree Display for Expression_cluster: WBPaper00045257:bar-1(ga80)_upregulated

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Name Class

WBPaper00045257:bar-1(ga80)_upregulatedDescriptionGenes that showed increased expression in bar-1(ga80) animal comparing to in N2.
SpeciesCaenorhabditis elegans
AlgorithmAll statistical analyses were performed using the statistical programming language R (version 2.13.1 x 64). A linear model was used to determine the effect and significance of the genotype on the expression levels (probe intensity + genotype + error). Using permutations of the original data in the same linear model, authors determined thresholds adjusted for multiple testing (FDR 0.05: -log10(p) > 2; FDR 0.01: -log10(p) > 3). To correct for the developmental difference between bar-1(ga80) and N2 authors used the developmental gene expression data from Snoek et al. (2014) together with the gene expression data generated for this study (bar-1(ga80) vs. N2) in one linear model (probe intensity, sample age + genotype + error). The intensities were corrected for batch effect and for sample age authors used an age of 44 hours for the bar-1(ga80) samples (as estimated), and 48 hours for the N2 samples.
ReferenceWBPaper00045257
Based_on_WB_Release220
GeneWBGene00012914
WBGene00012910
WBGene00021625
WBGene00013481
WBGene00011537
WBGene00012518
WBGene00008628
WBGene00018294
WBGene00022718
WBGene00007290
WBGene00022673
WBGene00017755
WBGene00008944
WBGene00005657
WBGene00007131
WBGene00012641
WBGene00003722
WBGene00021084
WBGene00021343
WBGene00021876
WBGene00004509
WBGene00020760
WBGene00017705
WBGene00017964
WBGene00011434
WBGene00020357
WBGene00009339
WBGene00003031
WBGene00022142
WBGene00023503
WBGene00000677
WBGene00008296
WBGene00015225
WBGene00015597
WBGene00004994
WBGene00022476
WBGene00011388
WBGene00021564
WBGene00008680
WBGene00022547
WBGene00009572
WBGene00015535
WBGene00021156
WBGene00020219
WBGene00000295
WBGene00006533
WBGene00009077
WBGene00006418
WBGene00021081
WBGene00016218
WBGene00017469
WBGene00003528
WBGene00016919
WBGene00018478
WBGene00022674
WBGene00020566
WBGene00021371
WBGene00012313
WBGene00008067
WBGene00012623
WBGene00022078
WBGene00003977
WBGene00004700
WBGene00013633
WBGene00008507
WBGene00007162
WBGene00007440
WBGene00009957
WBGene00013950
WBGene00015532
WBGene00004993
WBGene00000720
WBGene00018355
WBGene00000708
WBGene00015993
WBGene00015811
WBGene00007437
WBGene00020242
WBGene00000715
WBGene00008302
WBGene00000190
WBGene00044479
WBGene00002065
WBGene00045457
WBGene00018031
WBGene00007297
WBGene00007472
WBGene00004750
WBGene00001158
WBGene00012398
WBGene00010545
WBGene00015776
WBGene00010206
WBGene00013639
WBGene00007656
WBGene00021654
WBGene00009706
WBGene00007153
WBGene00007851
WBGene00008616
WBGene00007024
WBGene00010904
WBGene00013562
WBGene00044644
WBGene00002188
WBGene00021179
WBGene00012182
WBGene00012117
WBGene00044787
WBGene00000012
WBGene00007134
WBGene00001713
WBGene00020981
WBGene00015602
WBGene00006628
WBGene00010658
WBGene00010004
WBGene00018937
WBGene00044534
WBGene00018614
WBGene00008575
WBGene00017698
WBGene00004821
WBGene00021339
WBGene00017422
WBGene00001459
WBGene00008988
WBGene00013654
WBGene00003766
WBGene00019738
WBGene00020854
WBGene00004802
WBGene00009820
WBGene00005903
WBGene00000014
WBGene00018267
WBGene00010655
WBGene00017214
WBGene00016302
WBGene00015265
WBGene00044708
WBGene00011190
WBGene00012822
WBGene00005931
WBGene00022713
WBGene00010124
WBGene00009033
WBGene00010051
WBGene00008615
WBGene00006539
WBGene00022809
WBGene00002270
WBGene00044917
WBGene00007691
WBGene00044376
WBGene00019964
WBGene00018997
WBGene00023423
WBGene00008850
WBGene00045411
WBGene00015887
WBGene00001577
WBGene00015112
WBGene00016063
WBGene00011429
WBGene00012217
WBGene00013244
WBGene00044783
WBGene00005254
WBGene00019232
WBGene00011424
WBGene00012583
WBGene00017361
WBGene00009061
WBGene00012091
WBGene00022487
WBGene00013695
WBGene00010234
WBGene00018353
WBGene00020995
WBGene00020637
WBGene00010480
WBGene00044200
WBGene00044443
WBGene00012819
WBGene00018646
WBGene00013949
WBGene00010001
WBGene00015865
WBGene00012130
WBGene00012783
WBGene00022648
WBGene00002103
WBGene00023483
WBGene00007225
WBGene00008267
WBGene00020579
WBGene00016845
WBGene00009963
WBGene00009048
WBGene00012571
WBGene00012101
WBGene00044439
WBGene00012961
WBGene00022546
WBGene00012850
WBGene00044183
WBGene00004093
WBGene00007097
WBGene00016507
WBGene00001608
WBGene00045415
WBGene00015040
WBGene00050906
WBGene00016281
WBGene00007992
WBGene00017726
WBGene00001756
WBGene00020806
WBGene00018910
WBGene00007989
WBGene00008975
WBGene00016520
WBGene00002125
WBGene00021379
WBGene00009709
WBGene00015048
WBGene00019885
WBGene00001852
WBGene00016573
WBGene00018438
WBGene00009839
WBGene00021085
WBGene00008844
WBGene00000616
WBGene00004354
WBGene00013900
WBGene00004176
WBGene00017968
WBGene00044811
WBGene00006685
WBGene00011539
WBGene00004798
WBGene00015484
WBGene00010399
WBGene00000558
WBGene00044237
WBGene00008032
WBGene00007365
WBGene00019388
WBGene00023501
WBGene00021741
WBGene00010765
WBGene00009840
WBGene00007765
WBGene00019782
WBGene00008105
WBGene00010661
WBGene00016365
WBGene00011209
WBGene00008915
WBGene00013957
WBGene00020976
WBGene00011809
WBGene00017843
WBGene00018492
WBGene00012757
WBGene00016783
WBGene00043067
WBGene00016894
WBGene00015896
WBGene00019261
WBGene00011561
WBGene00012399
WBGene00000733
WBGene00010183
WBGene00009142
WBGene00021580
WBGene00011674
WBGene00021520
WBGene00010041
WBGene00013093
WBGene00009789
WBGene00022545
WBGene00012622
WBGene00000301
WBGene00004053
WBGene00015574
WBGene00013540
WBGene00012113
WBGene00003575
WBGene00015878
WBGene00044014
WBGene00012013
WBGene00020774
WBGene00002992
WBGene00022814
WBGene00003026
WBGene00015964
WBGene00007166
WBGene00008602
WBGene00017471
WBGene00010232
WBGene00011671
WBGene00018750
WBGene00010000
WBGene00017838
WBGene00044210
WBGene00015280
WBGene00000719
WBGene00001569
WBGene00004814
WBGene00004816
WBGene00016575
WBGene00016863
WBGene00018803
WBGene00018921
WBGene00019700
WBGene00021188
WBGene00007132
WBGene00007726
WBGene00005833
WBGene00014698
WBGene00007990
WBGene00009169
WBGene00050959
WBGene00043995
WBGene00045096
WBGene00019515
WBGene00045338
WBGene00020364
WBGene00011672
WBGene00011841
WBGene00044284
WBGene00012093
WBGene00020872
WBGene00012726
WBGene00021567
WBGene00021743
WBGene00004810
WBGene00050974
WBGene00021175
WBGene00022570
WBGene00022572
WBGene00014699
WBGene00006650
WBGene00000191
WBGene00022951
WBGene00007376
WBGene00014454
WBGene00014732
WBGene00014978
WBGene00016301
WBGene00019310
WBGene00022982
WBGene00044711
WBGene00045179
WBGene00045188
WBGene00045347
WBGene00077443
WBGene00019967
WBGene00000372
WBGene00004153
WBGene00004813
WBGene00009180
WBGene00004003
WBGene00011292
WBGene00004144
WBGene00010700
WBGene00001755
WBGene00000673
WBGene00016677
WBGene00011352
WBGene00003601
WBGene00011299
WBGene00020007
WBGene00008419
WBGene00011556
WBGene00008967
WBGene00009978
WBGene00010928
WBGene00021929
WBGene00002981
WBGene00016485
WBGene00008610
WBGene00016509
WBGene00019489
WBGene00002263
WBGene00009394
WBGene00003902
WBGene00017583
WBGene00011060
WBGene00006727
WBGene00009102
WBGene00003753
WBGene00010665
WBGene00006575
WBGene00010492
WBGene00000022
WBGene00016594
WBGene00004391
WBGene00016453
WBGene00008971
WBGene00011737
WBGene00006431
WBGene00016457
WBGene00003605
WBGene00004096
WBGene00004217
WBGene00006436
WBGene00016097
WBGene00006974
WBGene00003674
WBGene00003183
WBGene00003185
WBGene00003395
Attribute_ofMicroarray_experiment
RegulationRegulated_by_geneWBGene00000238
Associated_withLife_stageWBls:0000038