WormBase Tree Display for Gene: WBGene00013244
expand all nodes | collapse all nodes | view schema
| WBGene00013244 | SMap | S_parent | Sequence | Y56A3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y56A3A.33 | |||||||
| Molecular_name | Y56A3A.33 | ||||||||
| Y56A3A.33.1 | |||||||||
| CE54144 | |||||||||
| Other_name | CELE_Y56A3A.33 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y56A3A.33 | ||||||||
| DB_info | Database | AceView | gene | 3N90 | |||||
| WormQTL | gene | WBGene00013244 | |||||||
| WormFlux | gene | WBGene00013244 | |||||||
| NDB | locus_tag | CELE_Y56A3A.33 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013244|UniProtKB=Q9U220 | |||||||
| family | PTHR12801 | ||||||||
| NCBI | gene | 176636 | |||||||
| RefSeq | protein | NM_001379943.3 | |||||||
| TREEFAM | TREEFAM_ID | TF331871 | |||||||
| TrEMBL | UniProtAcc | Q9U220 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U220 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (90) | |||||||||
| Strain | WBStrain00036304 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098626 | ||||||||
| 00098627 | |||||||||
| 00098628 | |||||||||
| 00120144 | |||||||||
| 00120145 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00004095 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012465 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044217 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00015462 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021653 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable exonuclease activity. Predicted to be located in nucleus. Is an ortholog of human REXO1L1P (REXO1 like 1, pseudogene). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y56A3A.33 | |||||||
| Corresponding_CDS_history | Y56A3A.33:wp275 | ||||||||
| Corresponding_transcript | Y56A3A.33.1 | ||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf667487 | ||||||||
| WBsf717997 | |||||||||
| WBsf981612 | |||||||||
| WBsf994551 | |||||||||
| WBsf994552 | |||||||||
| WBsf994553 | |||||||||
| WBsf1016126 | |||||||||
| WBsf1016127 | |||||||||
| WBsf1016128 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012282 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021081 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006958 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064123 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012277 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057601 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020244 | ||||||||
| Expr1035902 | |||||||||
| Expr1161018 | |||||||||
| Expr2008005 | |||||||||
| Expr2026246 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction | WBInteraction000049190 | ||||||||
| WBInteraction000049218 | |||||||||
| WBInteraction000206937 | |||||||||
| WBInteraction000357538 | |||||||||
| WBInteraction000361157 | |||||||||
| Map_info | Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 13.828 | |||||||
| Reference | WBPaper00005736 | ||||||||
| WBPaper00035168 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
