WormBase Tree Display for Gene: WBGene00011561
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| WBGene00011561 | SMap | S_parent | Sequence | T07C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-15 | |||||||
| Sequence_name | T07C4.5 | ||||||||
| Molecular_name | T07C4.5 | ||||||||
| T07C4.5.1 | |||||||||
| CE03639 | |||||||||
| Other_name | CELE_T07C4.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ttr-15 | ||||||||
| DB_info | Database | AceView | gene | 3L429 | |||||
| WormQTL | gene | WBGene00011561 | |||||||
| WormFlux | gene | WBGene00011561 | |||||||
| NDB | locus_tag | CELE_T07C4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011561|UniProtKB=Q22288 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 176448 | |||||||
| RefSeq | protein | NM_066884.7 | |||||||
| SwissProt | UniProtAcc | Q22288 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| UniProt_GCRP | UniProtAcc | Q22288 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00074769 | ||||||||
| 00074770 | |||||||||
| 00118790 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07C4.5 | |||||||
| Corresponding_transcript | T07C4.5.1 | ||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf645559 | ||||||||
| WBsf993977 | |||||||||
| WBsf225711 | |||||||||
| WBsf225712 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006128 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018347 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035294 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052727 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027293 | ||||||||
| Expr1035096 | |||||||||
| Expr1156338 | |||||||||
| Expr2017579 | |||||||||
| Expr2035719 | |||||||||
| Drives_construct | WBCnstr00030559 | ||||||||
| Construct_product | WBCnstr00030559 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (256) | |||||||||
| Interaction (177) | |||||||||
| Map_info | Map | III | Position | 2.38152 | Error | 0.009884 | |||
| Positive | Positive_clone | T07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00049828 | ||||||||
| WBPaper00062002 | |||||||||
| WBPaper00063976 | |||||||||
| WBPaper00064789 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
