WormBase Tree Display for Gene: WBGene00017755
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| WBGene00017755 | SMap | S_parent | Sequence | F23F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | zip-8 | Person_evidence | WBPerson260 | |||||
| WBPerson460 | |||||||||
| Sequence_name | F23F12.9 | ||||||||
| Molecular_name | F23F12.9a | ||||||||
| F23F12.9a.1 | |||||||||
| CE01256 | |||||||||
| F23F12.9b | |||||||||
| CE32389 | |||||||||
| F23F12.9b.1 | |||||||||
| Other_name | CELE_F23F12.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | zip-8 | ||||||||
| DB_info | Database | AceView | gene | 3H569 | |||||
| WormQTL | gene | WBGene00017755 | |||||||
| WormFlux | gene | WBGene00017755 | |||||||
| NDB | locus_tag | CELE_F23F12.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017755|UniProtKB=P46505 | |||||||
| family | PTHR23334 | ||||||||
| NCBI | gene | 175924 | |||||||
| RefSeq | protein | NM_066025.5 | |||||||
| NM_181936.7 | |||||||||
| SwissProt | UniProtAcc | P46505 | |||||||
| UniProt_GCRP | UniProtAcc | P46505 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Sep 2011 16:44:07 | WBPerson2970 | Name_change | CGC_name | zip-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zip | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00002144 | ||||||||
| WBStrain00030131 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046256 | ||||||||
| 00046257 | |||||||||
| 00046258 | |||||||||
| 00046259 | |||||||||
| 00046260 | |||||||||
| 00046261 | |||||||||
| 00123062 | |||||||||
| 00123063 | |||||||||
| 00123064 | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00016754 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00016997 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021552 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019327 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | zip-8 encodes a bZip family transcription factor; the tm721 variation that affects zip-8 has been reported to result in lethality; a zip-8::gfp reporter fusion is expressed in the adult intestine. | Paper_evidence | WBPaper00027309 | |||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Feb 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23F12.9a | |||||||
| F23F12.9b | |||||||||
| Corresponding_transcript | F23F12.9a.1 | ||||||||
| F23F12.9b.1 | |||||||||
| Associated_feature | WBsf645270 | ||||||||
| WBsf978798 | |||||||||
| WBsf992778 | |||||||||
| WBsf1015102 | |||||||||
| WBsf225115 | |||||||||
| WBsf225116 | |||||||||
| WBsf225117 | |||||||||
| WBsf225118 | |||||||||
| Gene_product_binds (64) | |||||||||
| Transcription_factor | WBTranscriptionFactor000404 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031333 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068787 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045438 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013827 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005895 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002903 | ||||||||
| WBCnstr00015247 | |||||||||
| WBCnstr00022349 | |||||||||
| WBCnstr00027047 | |||||||||
| Construct_product | WBCnstr00016740 | ||||||||
| WBCnstr00022349 | |||||||||
| WBCnstr00027047 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (238) | |||||||||
| Interaction (182) | |||||||||
| Map_info | Map | III | Position | -1.1954 | Error | 0.002656 | |||
| Positive | Positive_clone | F23F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028945 | ||||||||
| WBPaper00058798 | |||||||||
| WBPaper00061738 | |||||||||
| WBPaper00061938 | |||||||||
| WBPaper00062117 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
