WormBase Tree Display for Gene: WBGene00010041
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| WBGene00010041 | SMap | S_parent | Sequence | F54C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54C9.3 | |||||||
| Molecular_name | F54C9.3 | ||||||||
| F54C9.3.1 | |||||||||
| CE02253 | |||||||||
| Other_name | CELE_F54C9.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54C9.3 | ||||||||
| DB_info | Database | AceView | gene | 2I856 | |||||
| WormQTL | gene | WBGene00010041 | |||||||
| WormFlux | gene | WBGene00010041 | |||||||
| NDB | locus_tag | CELE_F54C9.3 | |||||||
| NCBI | gene | 174369 | |||||||
| RefSeq | protein | NM_063408.7 | |||||||
| TrEMBL | UniProtAcc | Q20753 | |||||||
| UniProt_GCRP | UniProtAcc | Q20753 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00372363 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01429538 | |||||||||
| WBVar01499423 | |||||||||
| WBVar01498940 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2732 | ||||||||
| Ortholog (15) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapaa; ABaraapppaa; AFD; head mesodermal cell; and lateral ganglion based on tiling array; RNA-seq; proteomic; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray; RNA-seq; and tiling array studies. Is affected by nineteen chemicals including hydrogen sulfide; 1-methylnicotinamide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54C9.3 | |||||||
| Corresponding_transcript | F54C9.3.1 | ||||||||
| Other_sequence | CBC02710_1 | ||||||||
| CRC10494_1 | |||||||||
| CR04817 | |||||||||
| CJC02350_1 | |||||||||
| Associated_feature | WBsf650339 | ||||||||
| WBsf223517 | |||||||||
| WBsf223518 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015591 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048271 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032764 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027665 | ||||||||
| Expr1034375 | |||||||||
| Expr1152073 | |||||||||
| Expr2004128 | |||||||||
| Expr2022352 | |||||||||
| Drives_construct | WBCnstr00031715 | ||||||||
| Construct_product | WBCnstr00031715 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Positive | Positive_clone | F54C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.81724 | |||||||
| Method | Gene |
