WormBase Tree Display for Gene: WBGene00012583

WBGene00012583 SMap: S_parent: Sequence: Y38E10A
  Identity: Version: 2
    Name: CGC_name: clec-4 Person_evidence: WBPerson655
      Sequence_name: Y38E10A.5
      Molecular_name: Y38E10A.5
        Y38E10A.5.1
        CE28701
      Other_name: CELE_Y38E10A.5 Accession_evidence: NDB BX284602
      Public_name: clec-4
    DB_info: Database: AceView gene 2M868
        WormQTL gene WBGene00012583
        WormFlux gene WBGene00012583
        NDB locus_tag CELE_Y38E10A.5
        Panther gene CAEEL|WormBase=WBGene00012583|UniProtKB=Q9NAK5
          family PTHR22991
        NCBI gene 189654
        RefSeq protein NM_064287.4
        TREEFAM TREEFAM_ID TF351663
        TrEMBL UniProtAcc Q9NAK5
        UniProt_GCRP UniProtAcc Q9NAK5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:45 WBPerson2970 Name_change: CGC_name: clec-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (68)
    Possibly_affected_by: WBVar02154113
    Strain: WBStrain00032353
    RNASeq_FPKM (74)
    GO_annotation: 00096145
    Ortholog (13)
    Paralog (52)
    Structured_description: Concise_description: clec-4 encodes a C-type lectin; clec-4 expression is upregulated in response to stressors, including pathogens and ionizing radiation. Paper_evidence: WBPaper00041533
            WBPaper00028789
          Curator_confirmed: WBPerson1843
          Date_last_updated: 01 May 2013 00:00:00
      Automated_description: Acts upstream of or within with a positive effect on feeding behavior. Expressed in amphid neurons; int1DL; int1DR; int1VL; and int1VR. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.5
    Corresponding_CDS_history: Y38E10A.5:wp57
    Corresponding_transcript: Y38E10A.5.1
    Associated_feature: WBsf224080
      WBsf224081
  Experimental_info: RNAi_result: WBRNAi00020276 Inferred_automatically: RNAi_primary
      WBRNAi00091321 Inferred_automatically: RNAi_primary
      WBRNAi00056026 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15811
      Expr1020709
      Expr1035569
      Expr1159549
      Expr2010182
      Expr2028424
    Drives_construct: WBCnstr00042531
    Microarray_results (15)
    Expression_cluster (357)
    Interaction: WBInteraction000537372
      WBInteraction000537373
      WBInteraction000537392
      WBInteraction000537393
      WBInteraction000537406
    WBProcess: WBbiopr:00000039
      WBbiopr:00000092
  Map_info: Map: II Position: 10.4075 Error: 0.015845
    Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene