WormBase Tree Display for Gene: WBGene00001852
expand all nodes | collapse all nodes | view schema
WBGene00001852 | SMap | S_parent | Sequence | C30G7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | hil-1 | Person_evidence | WBPerson564 | |||||
Sequence_name | C30G7.1 | ||||||||
Molecular_name | C30G7.1 | ||||||||
C30G7.1.1 | |||||||||
CE08476 | |||||||||
Other_name | H1.X | Paper_evidence | WBPaper00004630 | ||||||
CELE_C30G7.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | hil-1 | ||||||||
DB_info | Database | AceView | gene | 5P431 | |||||
WormQTL | gene | WBGene00001852 | |||||||
WormFlux | gene | WBGene00001852 | |||||||
NDB | locus_tag | CELE_C30G7.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001852|UniProtKB=Q18336 | |||||||
family | PTHR11467 | ||||||||
NCBI | gene | 179993 | |||||||
RefSeq | protein | NM_074279.7 | |||||||
SwissProt | UniProtAcc | Q18336 | |||||||
UniProt_GCRP | UniProtAcc | Q18336 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hil | ||||||||
Allele (45) | |||||||||
Strain | WBStrain00035761 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (23) | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00001898 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001854 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001856 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001857 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001855 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001853 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable double-stranded DNA binding activity and nucleosomal DNA binding activity. Involved in several processes, including body morphogenesis; egg-laying behavior; and pharynx development. Located in intermediate filament cytoskeleton and nucleolus. Expressed in several structures, including body wall musculature; excretory system; head neurons; marginal cell; and vulval muscle. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C30G7.1 | |||||||
Corresponding_transcript | C30G7.1.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature | WBsf716605 | ||||||||
WBsf1002198 | |||||||||
WBsf1002199 | |||||||||
WBsf1020956 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041573 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064087 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022789 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011403 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr881 | ||||||||
Expr1926 | |||||||||
Expr1927 | |||||||||
Expr1024212 | |||||||||
Expr1145591 | |||||||||
Expr2012414 | |||||||||
Expr2030650 | |||||||||
Drives_construct | WBCnstr00010523 | ||||||||
WBCnstr00015913 | |||||||||
WBCnstr00036649 | |||||||||
Construct_product | WBCnstr00010523 | ||||||||
WBCnstr00036649 | |||||||||
Antibody | WBAntibody00000532 | ||||||||
WBAntibody00000533 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (270) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | V | Position | 7.02109 | Error | 0.009647 | |||
Positive | Positive_clone | C30G7 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4402 | |||||||
4632 | |||||||||
4759 | |||||||||
Pseudo_map_position | |||||||||
Reference (17) | |||||||||
Remark | Sequence connection from [Jedrusik MA, Vogt S, Claus P, Schulze E], [krb 020722] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |