WormBase Tree Display for CDS: C30G7.1
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C30G7.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C30G7 | |||
Structure | Source_exons | 1 | 135 | |||
186 | 284 | |||||
1860 | 1919 | |||||
2062 | 2196 | |||||
2543 | 2812 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q18336 | ||
UniProt | UniProtAcc | Q18336 | ||||
UniProt_GCRP | UniProtAcc | Q18336 | ||||
AlphaFold | entry | Q18336 | ||||
NCBI_protein | GI_number | GI:3874541 | ||||
Protein_id | CHROMOSOME_V | CAB01632 | 1 | |||
DB_remark | HIL-1 protein; contains similarity to Pfam domain PF00538 (linker histone H1 and H5 family); contains similarity to Interpro domains IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR005819 (Linker histone H1/H5), IPR005818 (Linker histone H1/H5, domain H15) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00001852 | ||||
Corresponding_transcript | C30G7.1.1 | |||||
Corresponding_protein | CE08476 | |||||
Corresponding_PCR_product | [cgc5366]:hil-1 | |||||
cenix:119-h6 | ||||||
mv_C30G7.1 | ||||||
sjj_C30G7.1 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (25) | ||||||
RNAi_result | WBRNAi00041573 | |||||
WBRNAi00064087 | ||||||
WBRNAi00022789 | ||||||
WBRNAi00011403 | ||||||
Microarray_results (16) | ||||||
Brief_identification | Histone H1.X | Accession_evidence | UniProt | SP:Q18336 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf010416 | |||||
Method | curated |