WormBase Tree Display for Gene: WBGene00015865
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WBGene00015865 | SMap | S_parent | Sequence | C16E9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C16E9.1 | |||||||
Molecular_name | C16E9.1 | ||||||||
C16E9.1.1 | |||||||||
CE35403 | |||||||||
Other_name | CELE_C16E9.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | C16E9.1 | ||||||||
DB_info | Database | AceView | gene | XH561 | |||||
WormQTL | gene | WBGene00015865 | |||||||
WormFlux | gene | WBGene00015865 | |||||||
NDB | locus_tag | CELE_C16E9.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015865|UniProtKB=Q18048 | |||||||
family | PTHR24020 | ||||||||
NCBI | gene | 182693 | |||||||
RefSeq | protein | NM_076775.6 | |||||||
TREEFAM | TREEFAM_ID | TF330078 | |||||||
TrEMBL | UniProtAcc | Q18048 | |||||||
UniProt_GCRP | UniProtAcc | Q18048 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (60) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00060067 | ||||||||
00060068 | |||||||||
00060069 | |||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00007800 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00015993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00016048 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00000853 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003482 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003497 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017965 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019570 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021343 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be an extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to be located in collagen-containing extracellular matrix. Is an ortholog of human MATN1 (matrilin 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16E9.1 | |||||||
Corresponding_CDS_history | C16E9.1:wp107 | ||||||||
Corresponding_transcript | C16E9.1.1 | ||||||||
Associated_feature | WBsf1005684 | ||||||||
WBsf235890 | |||||||||
WBsf235891 | |||||||||
Experimental_info | RNAi_result | WBRNAi00028978 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010872 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040740 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022003 | ||||||||
Expr1144785 | |||||||||
Expr2000884 | |||||||||
Expr2019103 | |||||||||
Drives_construct | WBCnstr00028502 | ||||||||
Construct_product | WBCnstr00028502 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (224) | |||||||||
Interaction | WBInteraction000137019 | ||||||||
WBInteraction000343151 | |||||||||
WBInteraction000372434 | |||||||||
WBInteraction000385869 | |||||||||
WBInteraction000394016 | |||||||||
WBInteraction000419988 | |||||||||
WBInteraction000437583 | |||||||||
WBInteraction000454106 | |||||||||
Map_info | Positive | Positive_clone | C16E9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -1.96459 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00064099 | |||||||||
Method | Gene |