WormBase Tree Display for Gene: WBGene00020357
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| WBGene00020357 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T08E11.1 | |||||||
| Molecular_name | T08E11.1 | ||||||||
| T08E11.1.1 | |||||||||
| CE30167 | |||||||||
| Other_name | CELE_T08E11.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T08E11.1 | ||||||||
| DB_info | Database | AceView | gene | 2C119 | |||||
| WormQTL | gene | WBGene00020357 | |||||||
| WormFlux | gene | WBGene00020357 | |||||||
| NDB | locus_tag | CELE_T08E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020357|UniProtKB=O76644 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188287 | |||||||
| RefSeq | protein | NM_061689.6 | |||||||
| TREEFAM | TREEFAM_ID | TF322099 | |||||||
| TrEMBL | UniProtAcc | O76644 | |||||||
| UniProt_GCRP | UniProtAcc | O76644 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (142) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Paralog (221) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercury hydroxide; methylmercuric chloride; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08E11.1 | |||||||
| Corresponding_transcript | T08E11.1.1 | ||||||||
| Associated_feature | WBsf220884 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052871 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070157 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095017 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035354 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095026 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018446 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010361 | ||||||||
| Expr1156469 | |||||||||
| Expr2006005 | |||||||||
| Drives_construct | WBCnstr00025195 | ||||||||
| Construct_product | WBCnstr00025195 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (186) | |||||||||
| Interaction | WBInteraction000186682 | ||||||||
| WBInteraction000416537 | |||||||||
| WBInteraction000521190 | |||||||||
| Map_info | Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -14.317 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
