WormBase Tree Display for Gene: WBGene00020566
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| WBGene00020566 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-7 | |||||||
| Sequence_name | T19C3.9 | ||||||||
| Molecular_name | T19C3.9 | ||||||||
| T19C3.9.1 | |||||||||
| CE35018 | |||||||||
| Other_name | T19C3.i | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T19C3.9 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | ttr-7 | ||||||||
| DB_info | Database | AceView | gene | 3B225 | |||||
| WormQTL | gene | WBGene00020566 | |||||||
| WormFlux | gene | WBGene00020566 | |||||||
| NDB | locus_tag | CELE_T19C3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020566|UniProtKB=Q7YZH4 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 175213 | |||||||
| RefSeq | protein | NM_001027599.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q7YZH4 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YZH4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082920 | ||||||||
| 00125172 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19C3.9 | |||||||
| Corresponding_transcript | T19C3.9.1 | ||||||||
| Other_sequence | OOC03226_1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035660 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1012995 | ||||||||
| Expr1157079 | |||||||||
| Expr2017626 | |||||||||
| Expr2035766 | |||||||||
| Drives_construct | WBCnstr00025045 | ||||||||
| Construct_product | WBCnstr00025045 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (146) | |||||||||
| Map_info | Map | III | Position | -26.5557 | |||||
| Positive | Positive_clone | T19C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
