WormBase Tree Display for Gene: WBGene00012623

WBGene00012623 SMap: S_parent: Sequence: Y38H6C
  Identity: Version: 3
    Name: CGC_name: fbxa-149 Person_evidence: WBPerson655
      Sequence_name: Y38H6C.10
      Molecular_name: Y38H6C.10
      Other_name: CELE_Y38H6C.10 Accession_evidence: NDB BX284605
      Public_name: fbxa-149
    DB_info: Database: AceView gene 5U988
        WormQTL gene WBGene00012623
        WormFlux gene WBGene00012623
        NDB locus_tag CELE_Y38H6C.10
        NCBI gene 189691
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-149
        3 18 Feb 2016 15:22:53 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: fbxa
    Allele (87)
    RNASeq_FPKM (74)
    Ortholog: WBGene00057801 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      WBGene00144343 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00149321 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00155764 Caenorhabditis brenneri From_analysis: Inparanoid_8
    Paralog: WBGene00007323 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00012622 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00018615 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013610 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021390 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00012624 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00022630 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013421 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in NSM; RID; and sensory neurons based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and clk-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including rotenone; allantoin; and Rifampin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: Y38H6C.10:wp252
    Corresponding_pseudogene: Y38H6C.10
    Associated_feature: WBsf653616
  Experimental_info: Expr_pattern: Expr1013403
      Expr1159584
    Microarray_results (14)
    Expression_cluster (75)
    Interaction (18)
  Map_info: Map: V Position: 25.0064 Error: 0.000207
    Positive: Positive_clone: Y38H6C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene