WormBase Tree Display for Gene: WBGene00022630
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| WBGene00022630 | SMap | S_parent | Sequence | ZC513 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-223 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | ZC513.10 | |||||||||
| Molecular_name | ZC513.10 | |||||||||
| Other_name | CELE_ZC513.10 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fbxa-223 | |||||||||
| DB_info | Database | AceView | gene | 5I542 | ||||||
| WormQTL | gene | WBGene00022630 | ||||||||
| WormFlux | gene | WBGene00022630 | ||||||||
| NDB | locus_tag | CELE_ZC513.10 | ||||||||
| NCBI | gene | 191196 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-223 | |||||
| 3 | 18 Feb 2016 15:28:32 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (30) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00007323 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00012622 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00012623 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00012624 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00013421 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00013610 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00018615 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00021390 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Concise_description | fbxa-223 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-223 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in head mesodermal cell and in male based on RNA-seq studies. Is affected by several genes including eat-2; pmk-1; and npr-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including hydrogen sulfide; methylmercuric chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | ZC513.10:wp252 | ||||||||
| Corresponding_pseudogene | ZC513.10 | |||||||||
| Associated_feature | WBsf669143 | |||||||||
| WBsf1000576 | ||||||||||
| Experimental_info | Expr_pattern | Expr1015651 | ||||||||
| Expr1162420 | ||||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (60) | ||||||||||
| Interaction (12) | ||||||||||
| Map_info | Map | V | Position | 1.00602 | Error | 6.2e-05 | ||||
| Positive | Positive_clone | ZC513 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00012854 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
