WormBase Tree Display for Gene: WBGene00012624

WBGene00012624 SMap: S_parent: Sequence: Y38H6C
  Identity: Version: 2
    Name: CGC_name: fbxa-150 Person_evidence: WBPerson655
      Sequence_name: Y38H6C.11
      Molecular_name: Y38H6C.11
        Y38H6C.11.1
        CE19105
      Other_name: CELE_Y38H6C.11 Accession_evidence: NDB BX284605
      Public_name: fbxa-150
    DB_info: Database: AceView gene 5U995
        WormQTL gene WBGene00012624
        WormFlux gene WBGene00012624
        NDB locus_tag CELE_Y38H6C.11
        Panther gene CAEEL|WormBase=WBGene00012624|UniProtKB=Q9XX49
          family PTHR23015
        NCBI gene 189692
        RefSeq protein NM_075553.2
        TREEFAM TREEFAM_ID TF315839
        TrEMBL UniProtAcc Q9XX49
        UniProt_GCRP UniProtAcc Q9XX49
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-150
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (99)
    RNASeq_FPKM (74)
    GO_annotation: 00104140
    Ortholog: WBGene00057801 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155764 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00149321 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00146220 Caenorhabditis brenneri From_analysis: OMA
      WBGene00144343 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      Csp11.Scaffold630.g21620 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04735.g33619 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12957 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019547 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g18104 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (213)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38H6C.11
    Corresponding_transcript: Y38H6C.11.1
    Associated_feature: WBsf647745
  Experimental_info: RNAi_result: WBRNAi00020313 Inferred_automatically: RNAi_primary
      WBRNAi00036863 Inferred_automatically: RNAi_primary
      WBRNAi00056062 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022247
      Expr1159585
      Expr2011482
      Expr2029720
    Drives_construct: WBCnstr00029878
    Construct_product: WBCnstr00029878
    Microarray_results (17)
    Expression_cluster (169)
    Interaction: WBInteraction000238769
      WBInteraction000400575
      WBInteraction000442866
  Map_info: Map: V Position: 25.0075 Error: 0.000432
    Positive: Positive_clone: Y38H6C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene