WormBase Tree Display for Gene: WBGene00009061

WBGene00009061 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 3
    Name: CGC_name: pals-14 Person_evidence: WBPerson260
      Sequence_name: F22G12.1
      Molecular_name: F22G12.1
        WP:CE39571
        CE39571
        F22G12.1.1
      Other_name: CELE_F22G12.1 Accession_evidence: NDB BX284601
      Public_name: pals-14
    DB_info: Database: AceView gene 1N727
            1N731
        WormQTL gene WBGene00009061
        WormFlux gene WBGene00009061
        NDB locus_tag CELE_F22G12.1
        NCBI gene 184866
        RefSeq mRNA NM_060901.2
          protein NP_493302.2
            NM_060901.4
        TREEFAM TREEFAM_ID TF322878
        UniProt UniProtAcc G5ED04
        TrEMBL UniProtAcc G5ED04
        UniProt_GCRP UniProtAcc G5ED04
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Jan 2006 09:34:57 WBPerson1983 Event: Split_into: WBGene00044707
        3 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-14
      Split_into: WBGene00044707
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (39)
    Strain: WBStrain00050891
    RNASeq_FPKM (74)
    Ortholog: Sp34_50055100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2660 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007656 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007658 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007662 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00013294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016281 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044237 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044711 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in dopaminergic neurons and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including Nitric Oxide; Ethanol; and Psoralens based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F22G12.1
    Corresponding_CDS_history: F22G12.1:wp153
    Corresponding_transcript: F22G12.1.1
    Associated_feature: WBsf1011017
      WBsf218682
      WBsf218683
  Experimental_info: RNAi_result: WBRNAi00116208 Inferred_automatically: RNAi_primary
      WBRNAi00116226 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020881
      Expr1149285
      Expr2014689
      Expr2032923
    Drives_construct: WBCnstr00032490
    Construct_product: WBCnstr00032490
    Microarray_results: A_12_P154145
      A_12_P154146
      GPL14144_F22G12.1_905-964_0.930_5_A
      GPL19516_CGZ0017619
      GPL21109_F22G12.1
      GPL8304_CE_WBGene00009061_A
      GPL8304_CE_WBGene00009061_B
      GPL8673_F22G12_1P00001
      GPL8673_F22G12_1P00099
      GPL8673_F22G12_1P00664
    Expression_cluster (229)
    Interaction (94)
  Map_info: Map: I Position: 17.2233
    Positive: Positive_clone: F22G12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061877
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene