WormBase Tree Display for Gene: WBGene00007662

WBGene00007662 SMap: S_parent: Sequence: C17H1
  Identity: Version: 2
    Name: CGC_name: pals-8 Person_evidence: WBPerson260
      Sequence_name: C17H1.9
      Molecular_name: C17H1.9
        WP:CE34700
        CE34700
        C17H1.9.1
      Other_name: CELE_C17H1.9 Accession_evidence: NDB BX284601
      Public_name: pals-8
    DB_info: Database: AceView gene 1N711
        WormQTL gene WBGene00007662
        WormFlux gene WBGene00007662
        NDB locus_tag CELE_C17H1.9
        NCBI gene 3565285
        RefSeq mRNA NM_001025832.3
          protein NP_001021003.1
            NM_001025832.4
        TREEFAM TREEFAM_ID TF322878
        UniProt UniProtAcc Q7YX94
        TrEMBL UniProtAcc Q7YX94
        UniProt_GCRP UniProtAcc Q7YX94
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (47)
    RNASeq_FPKM (74)
    Ortholog: Sp34_50055100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2654 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007656 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007658 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00044711 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
            WormBase-Compara
      WBGene00009061 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00044722 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00013294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016281 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044237 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in AIZ; AVG; dopaminergic neurons; and mechanosensory neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and elt-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including Mercuric Chloride; Zidovudine; and allantoin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17H1.9
    Corresponding_transcript: C17H1.9.1
    Associated_feature: WBsf985776
      WBsf985777
      WBsf985778
      WBsf985779
      WBsf1011014
      WBsf1011015
      WBsf218680
  Experimental_info: Expr_pattern: Expr1144899
      Expr2014714
      Expr2032949
    Drives_construct: WBCnstr00033570
    Construct_product: WBCnstr00033570
    Microarray_results: A_12_P112086
      GPL19516_CGZ0005181
      GPL21109_C17H1.28
      GPL21109_C17H1.9
      GPL8304_CE_WBGene00007662_A
      GPL8304_CE_WBGene00007662_B
      GPL8673_C17H1_9P00761
      GPL8673_C17H1_9P00843
      GPL8673_C17H1_9P01003
    Expression_cluster (92)
  Map_info: Map: I Position: 17.2211
    Positive: Positive_clone: C17H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene