WormBase Tree Display for Gene: WBGene00016453
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| WBGene00016453 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | vet-2 | Person_evidence | WBPerson481 | |||||
| WBPerson698 | |||||||||
| Sequence_name | C35E7.1 | ||||||||
| Molecular_name | C35E7.1 | ||||||||
| C35E7.1.1 | |||||||||
| CE47945 | |||||||||
| Other_name | CELE_C35E7.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | vet-2 | ||||||||
| DB_info | Database | AceView | gene | 1L423 | |||||
| WormQTL | gene | WBGene00016453 | |||||||
| WormFlux | gene | WBGene00016453 | |||||||
| NDB | locus_tag | CELE_C35E7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016453|UniProtKB=O61775 | |||||||
| family | PTHR21504 | ||||||||
| NCBI | gene | 172993 | |||||||
| RefSeq | protein | NM_001264586.7 | |||||||
| TrEMBL | UniProtAcc | O61775 | |||||||
| UniProt_GCRP | UniProtAcc | O61775 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 May 2010 11:43:28 | WBPerson2970 | Event | Acquires_merge | WBGene00006899 | ||||
| Name_change | CGC_name | vet-2 | |||||||
| Acquires_merge | WBGene00006899 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vet | ||||||||
| Allele (52) | |||||||||
| Legacy_information | [C.elegansII] NMK. Abundant pre-gastrulation transcript. [Schauer and Wood 1990; BW] | ||||||||
| Strain | WBStrain00031992 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036266 | ||||||||
| 00122077 | |||||||||
| Ortholog (11) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in autophagy. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C35E7.1 | |||||||
| Corresponding_CDS_history | C35E7.1:wp116 | ||||||||
| C35E7.1:wp221 | |||||||||
| C35E7.1a:wp234 | |||||||||
| C35E7.1b:wp234 | |||||||||
| C35E7.1b:wp277 | |||||||||
| Corresponding_transcript | C35E7.1.1 | ||||||||
| Associated_feature | WBsf656926 | ||||||||
| WBsf656927 | |||||||||
| WBsf218499 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003087 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041999 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024897 | ||||||||
| Expr1037054 | |||||||||
| Expr1146008 | |||||||||
| Expr2017971 | |||||||||
| Expr2036107 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction (53) | |||||||||
| Map_info | Map | I | Position | 5.35979 | Error | 0.03232 | |||
| Positive | Positive_clone | C35E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002526 | ||||||||
| WBPaper00032509 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00047234 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
