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WormBase Tree Display for Gene: WBGene00020637

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Name Class

WBGene00020637SMapS_parentSequenceT20H9
IdentityVersion2
NameCGC_namefbxa-7Person_evidenceWBPerson655
Sequence_nameT20H9.1
Molecular_nameT20H9.1
T20H9.1.1
CE39410
Other_nameCELE_T20H9.1Accession_evidenceNDBBX284603
Public_namefbxa-7
DB_infoDatabaseAceViewgene3D336
WormQTLgeneWBGene00020637
WormFluxgeneWBGene00020637
NDBlocus_tagCELE_T20H9.1
PanthergeneCAEEL|WormBase=WBGene00020637|UniProtKB=O44892
familyPTHR23015
NCBIgene188664
RefSeqproteinNM_065122.3
TREEFAMTREEFAM_IDTF322006
TrEMBLUniProtAccO44892
UniProt_GCRPUniProtAccO44892
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
212 Dec 2005 15:18:56WBPerson2970Name_changeCGC_namefbxa-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfbxa
Allele (33)
RNASeq_FPKM (74)
Ortholog (44)
Paralog (225)
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq studies. Is affected by several genes including skn-1; sir-2.1; and lin-35 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Mercuric Chloride; allantoin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; F-box domain; FTH domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDST20H9.1
Corresponding_CDS_historyT20H9.1:wp151
Corresponding_transcriptT20H9.1.1
Experimental_infoRNAi_resultWBRNAi00006611Inferred_automaticallyRNAi_primary
WBRNAi00053677Inferred_automaticallyRNAi_primary
WBRNAi00018937Inferred_automaticallyRNAi_primary
Expr_patternExpr1021540
Expr1157230
Microarray_results (14)
Expression_cluster (65)
Interaction (26)
Map_infoMapIIIPosition-14.859Error0.002335
PositivePositive_cloneT20H9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene