WormBase Tree Display for Gene: WBGene00012182
expand all nodes | collapse all nodes | view schema
| WBGene00012182 | SMap | S_parent | Sequence | W01D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | osta-3 | Person_evidence | WBPerson7115 | |||||
| WBPerson573 | |||||||||
| Sequence_name | W01D2.5 | ||||||||
| Molecular_name | W01D2.5a | ||||||||
| W01D2.5a.1 | |||||||||
| CE20128 | |||||||||
| W01D2.5b | |||||||||
| CE48560 | |||||||||
| W01D2.5a.2 | |||||||||
| W01D2.5b.1 | |||||||||
| Other_name | CELE_W01D2.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | osta-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Jun 2012 17:03:10 | WBPerson2970 | Name_change | CGC_name | osta-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | osta | ||||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101511 | ||||||||
| 00101512 | |||||||||
| 00101513 | |||||||||
| 00101514 | |||||||||
| 00101515 | |||||||||
| 00105071 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00009574 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00015942 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015287 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in ciliated neurons. Human ortholog(s) of this gene implicated in progressive familial intrahepatic cholestasis. Is an ortholog of human SLC51A (solute carrier family 51 member A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070221 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29955) | ||||
| Molecular_info | Corresponding_CDS | W01D2.5a | |||||||
| W01D2.5b | |||||||||
| Corresponding_transcript | W01D2.5a.1 | ||||||||
| W01D2.5a.2 | |||||||||
| W01D2.5b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf654928 | ||||||||
| WBsf990822 | |||||||||
| WBsf990823 | |||||||||
| WBsf990824 | |||||||||
| WBsf990825 | |||||||||
| WBsf1013907 | |||||||||
| WBsf1013908 | |||||||||
| WBsf222511 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054527 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019468 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036150 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062392 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11187 | ||||||||
| Expr1016714 | |||||||||
| Expr1035386 | |||||||||
| Expr1158072 | |||||||||
| Expr2014653 | |||||||||
| Expr2032886 | |||||||||
| Drives_construct | WBCnstr00017767 | ||||||||
| WBCnstr00030080 | |||||||||
| Construct_product | WBCnstr00030080 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction | WBInteraction000285895 | ||||||||
| WBInteraction000452512 | |||||||||
| WBInteraction000544146 | |||||||||
| Map_info | Map | II | Position | 23.5298 | |||||
| Positive | Positive_clone | W01D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
