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WormBase Tree Display for Gene: WBGene00007990

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Name Class

WBGene00007990SMapS_parentSequenceC37A5
IdentityVersion2
NameCGC_namefipr-23Person_evidenceWBPerson168
Sequence_nameC37A5.4
Molecular_nameC37A5.4
C37A5.4.1
CE17530
Other_nameCELE_C37A5.4Accession_evidenceNDBBX284601
Public_namefipr-23
DB_infoDatabaseAceViewgene1O746
WormQTLgeneWBGene00007990
WormFluxgeneWBGene00007990
NDBlocus_tagCELE_C37A5.4
PanthergeneCAEEL|WormBase=WBGene00007990|UniProtKB=O62091
familyPTHR36521
NCBIgene173283
RefSeqproteinNM_061068.5
TREEFAMTREEFAM_IDTF322357
TrEMBLUniProtAccO62091
UniProt_GCRPUniProtAccO62091
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Apr 2007 10:48:52WBPerson2970Name_changeCGC_namefipr-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfipr
Allele (14)
RNASeq_FPKM (74)
GO_annotation00036741
OrthologWBGene00140729Caenorhabditis brenneriFrom_analysisInparanoid_8
chrI_pilon.g2862Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00000560Caenorhabditis elegansFrom_analysisPanther
WBGene00007682Caenorhabditis elegansFrom_analysisPanther
WBGene00007989Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00007992Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00014698Caenorhabditis elegansFrom_analysisPanther
WBGene00014699Caenorhabditis elegansFrom_analysisPanther
WBGene00045211Caenorhabditis elegansFrom_analysisPanther
WBGene00194727Caenorhabditis elegansFrom_analysisPanther
WBGene00014700Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSC37A5.4
Corresponding_transcriptC37A5.4.1
Associated_featureWBsf220584
WBsf220585
Experimental_infoRNAi_resultWBRNAi00042098Inferred_automaticallyRNAi_primary
WBRNAi00003119Inferred_automaticallyRNAi_primary
WBRNAi00042097Inferred_automaticallyRNAi_primary
WBRNAi00002036Inferred_automaticallyRNAi_primary
Expr_patternExpr1146098
Expr2011780
Expr2030017
Microarray_results (18)
Expression_cluster (157)
Interaction (17)
Map_infoMapIPosition23.3614Error0.056675
PositivePositive_cloneC37A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene