WormBase Tree Display for Gene: WBGene00012783
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| WBGene00012783 | SMap | S_parent | Sequence | Y43C5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y43C5A.3 | |||||||
| Molecular_name | Y43C5A.3 | ||||||||
| Y43C5A.3.1 | |||||||||
| CE19152 | |||||||||
| Other_name | CELE_Y43C5A.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y43C5A.3 | ||||||||
| DB_info | Database | AceView | gene | 4L37 | |||||
| WormQTL | gene | WBGene00012783 | |||||||
| WormFlux | gene | WBGene00012783 | |||||||
| NDB | locus_tag | CELE_Y43C5A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012783|UniProtKB=Q9XXF1 | |||||||
| family | PTHR22552 | ||||||||
| NCBI | gene | 189848 | |||||||
| RefSeq | protein | NM_069483.7 | |||||||
| TREEFAM | TREEFAM_ID | TF319934 | |||||||
| TrEMBL | UniProtAcc | Q9XXF1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XXF1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| Strain | WBStrain00037039 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104335 | ||||||||
| 00104336 | |||||||||
| 00104337 | |||||||||
| 00104338 | |||||||||
| 00104339 | |||||||||
| 00104340 | |||||||||
| 00104341 | |||||||||
| Ortholog | WBGene00027084 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00059261 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| WBGene00130957 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00074871 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| chrIV_pilon.g11556 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enables double-stranded DNA binding activity. Involved in defense response to Gram-negative bacterium and killing of cells of another organism. Expressed in hyp7 syncytium and ventral cord blast cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y43C5A.3 | |||||||
| Corresponding_transcript | Y43C5A.3.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf660574 | ||||||||
| WBsf997583 | |||||||||
| WBsf1018065 | |||||||||
| WBsf228972 | |||||||||
| WBsf228973 | |||||||||
| WBsf228974 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037032 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020520 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11715 | ||||||||
| Expr11734 | |||||||||
| Expr12391 | |||||||||
| Expr1022016 | |||||||||
| Expr1159935 | |||||||||
| Expr2007475 | |||||||||
| Expr2025712 | |||||||||
| Drives_construct | WBCnstr00019340 | ||||||||
| WBCnstr00020813 | |||||||||
| WBCnstr00029843 | |||||||||
| Construct_product | WBCnstr00029843 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (303) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Positive | Positive_clone | Y43C5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.56507 | |||||||
| Reference | WBPaper00050183 | ||||||||
| WBPaper00060703 | |||||||||
| Method | Gene |
