WormBase Tree Display for Gene: WBGene00021081
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WBGene00021081 | SMap | S_parent | Sequence | W08A12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pals-33 | Person_evidence | WBPerson260 | |||||
Sequence_name | W08A12.4 | ||||||||
Molecular_name | W08A12.4 | ||||||||
WP:CE50562 | |||||||||
CE50562 | |||||||||
W08A12.4.1 | |||||||||
Other_name | CELE_W08A12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | pals-33 | ||||||||
DB_info | Database | AceView | gene | 5E153 | |||||
WormQTL | gene | WBGene00021081 | |||||||
WormFlux | gene | WBGene00021081 | |||||||
NDB | locus_tag | CELE_W08A12.4 | |||||||
NCBI | gene | 189288 | |||||||
RefSeq | mRNA | NM_071625.2 | |||||||
protein | NP_504026.2 | ||||||||
NM_071625.3 | |||||||||
UniProt | UniProtAcc | O01622 | |||||||
TrEMBL | UniProtAcc | O01622 | |||||||
UniProt_GCRP | UniProtAcc | O01622 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-33 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pals | ||||||||
Allele (57) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (12) | |||||||||
Structured_description | Automated_description | Enriched in body wall muscle cell; excretory cell; intestine; neurons; and retrovesicular ganglion based on tiling array and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including tryptophan; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W08A12.4 | |||||||
Corresponding_CDS_history | W08A12.4:wp220 | ||||||||
W08A12.4:wp247 | |||||||||
Corresponding_transcript | W08A12.4.1 | ||||||||
Other_sequence | GP00753 | ||||||||
GPC00306_1 | |||||||||
Associated_feature | WBsf999664 | ||||||||
WBsf999665 | |||||||||
Experimental_info | RNAi_result | WBRNAi00070145 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019713 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054971 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012561 | ||||||||
Expr1158506 | |||||||||
Expr2014705 | |||||||||
Expr2032941 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (270) | |||||||||
Interaction | WBInteraction000249412 | ||||||||
WBInteraction000378060 | |||||||||
WBInteraction000402846 | |||||||||
WBInteraction000425647 | |||||||||
WBInteraction000585375 | |||||||||
Map_info | Map | V | Position | -8.23619 | |||||
Positive | Positive_clone | W08A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00061319 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |