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WormBase Tree Display for Gene: WBGene00012398

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Name Class

WBGene00012398SMapS_parentSequenceY6E2A
IdentityVersion1
NameSequence_nameY6E2A.4
Molecular_nameY6E2A.4
Y6E2A.4.1
CE42248
Y6E2A.4.2
Other_nameCELE_Y6E2A.4Accession_evidenceNDBBX284605
Public_nameY6E2A.4
DB_infoDatabaseAceViewgene5Q194
WormQTLgeneWBGene00012398
WormFluxgeneWBGene00012398
NDBlocus_tagCELE_Y6E2A.4
PanthergeneCAEEL|WormBase=WBGene00012398|UniProtKB=O45969
familyPTHR21566
NCBIgene189374
RefSeqproteinNM_001392675.1
TREEFAMTREEFAM_IDTF317792
TrEMBLUniProtAccO45969
UniProt_GCRPUniProtAccO45969
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (80)
RNASeq_FPKM (74)
Ortholog (21)
ParalogWBGene00010004Caenorhabditis elegansFrom_analysisPanther
WBGene00010508Caenorhabditis elegansFrom_analysisPanther
WBGene00012381Caenorhabditis elegansFrom_analysisPanther
WBGene00015223Caenorhabditis elegansFrom_analysisPanther
WBGene00022549Caenorhabditis elegansFrom_analysisPanther
WBGene00012399Caenorhabditis elegansFrom_analysisPanther
WBGene00022548Caenorhabditis elegansFrom_analysisPanther
WBGene00022547Caenorhabditis elegansFrom_analysisPanther
WBGene00012400Caenorhabditis elegansFrom_analysisPanther
WBGene00015221Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in several structures, including coelomocyte; head mesodermal cell; male distal tip cell; neurons; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-three chemicals including Tunicamycin; levamisole; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF713 and Protein of unknown function (DUF713).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY6E2A.4
Corresponding_CDS_historyY6E2A.4:wp80
Y6E2A.4:wp188
Corresponding_transcriptY6E2A.4.1
Y6E2A.4.2
Other_sequenceCBC02730_1
MI00646
MIC00746_1
FG349090.1
FG586379.1
Associated_featureWBsf019797
WBsf235080
Experimental_infoRNAi_resultWBRNAi00037748Inferred_automaticallyRNAi_primary
WBRNAi00021348Inferred_automaticallyRNAi_primary
WBRNAi00058104Inferred_automaticallyRNAi_primary
WBRNAi00021347Inferred_automaticallyRNAi_primary
WBRNAi00058103Inferred_automaticallyRNAi_primary
WBRNAi00037749Inferred_automaticallyRNAi_primary
WBRNAi00058105Inferred_automaticallyRNAi_primary
Expr_patternExpr1015710
Expr1161516
Expr2008251
Expr2026494
Drives_constructWBCnstr00029973
Construct_productWBCnstr00029973
Microarray_results (37)
Expression_cluster (319)
Interaction (29)
Map_infoPositivePositive_cloneY6E2AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV8.67712
MethodGene