WormBase Tree Display for Gene: WBGene00012398
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WBGene00012398 | SMap | S_parent | Sequence | Y6E2A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y6E2A.4 | |||||||
Molecular_name | Y6E2A.4 | ||||||||
Y6E2A.4.1 | |||||||||
CE42248 | |||||||||
Y6E2A.4.2 | |||||||||
Other_name | CELE_Y6E2A.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | Y6E2A.4 | ||||||||
DB_info | Database | AceView | gene | 5Q194 | |||||
WormQTL | gene | WBGene00012398 | |||||||
WormFlux | gene | WBGene00012398 | |||||||
NDB | locus_tag | CELE_Y6E2A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012398|UniProtKB=O45969 | |||||||
family | PTHR21566 | ||||||||
NCBI | gene | 189374 | |||||||
RefSeq | protein | NM_001392675.1 | |||||||
TREEFAM | TREEFAM_ID | TF317792 | |||||||
TrEMBL | UniProtAcc | O45969 | |||||||
UniProt_GCRP | UniProtAcc | O45969 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (80) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Paralog (10) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including coelomocyte; head mesodermal cell; male distal tip cell; neurons; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-three chemicals including Tunicamycin; levamisole; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF713 and Protein of unknown function (DUF713). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y6E2A.4 | |||||||
Corresponding_CDS_history | Y6E2A.4:wp80 | ||||||||
Y6E2A.4:wp188 | |||||||||
Corresponding_transcript | Y6E2A.4.1 | ||||||||
Y6E2A.4.2 | |||||||||
Other_sequence | CBC02730_1 | ||||||||
MI00646 | |||||||||
MIC00746_1 | |||||||||
FG349090.1 | |||||||||
FG586379.1 | |||||||||
Associated_feature | WBsf019797 | ||||||||
WBsf235080 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037748 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021348 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058104 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021347 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058103 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037749 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058105 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015710 | ||||||||
Expr1161516 | |||||||||
Expr2008251 | |||||||||
Expr2026494 | |||||||||
Drives_construct | WBCnstr00029973 | ||||||||
Construct_product | WBCnstr00029973 | ||||||||
Microarray_results (37) | |||||||||
Expression_cluster (319) | |||||||||
Interaction (29) | |||||||||
Map_info | Positive | Positive_clone | Y6E2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 8.67712 | |||||||
Method | Gene |