WormBase Tree Display for Gene: WBGene00010004
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| WBGene00010004 | SMap | S_parent | Sequence | F53H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F53H2.1 | |||||||
| Molecular_name | F53H2.1a | ||||||||
| F53H2.1a.1 | |||||||||
| CE43551 | |||||||||
| F53H2.1b | |||||||||
| CE50728 | |||||||||
| F53H2.1c | |||||||||
| CE50789 | |||||||||
| F53H2.1b.1 | |||||||||
| F53H2.1c.1 | |||||||||
| Other_name | CELE_F53H2.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F53H2.1 | ||||||||
| DB_info | Database | AceView | gene | 5U859 | |||||
| WormQTL | gene | WBGene00010004 | |||||||
| WormFlux | gene | WBGene00010004 | |||||||
| NDB | locus_tag | CELE_F53H2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010004|UniProtKB=Q9U3E6 | |||||||
| family | PTHR21566 | ||||||||
| NCBI | gene | 186191 | |||||||
| RefSeq | protein | NM_075528.2 | |||||||
| NM_001313188.1 | |||||||||
| NM_001313189.1 | |||||||||
| TrEMBL | UniProtAcc | Q9U3E6 | |||||||
| A0A0K3AS53 | |||||||||
| A0A0K3AVM5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9U3E6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (146) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00015223 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022549 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00012399 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022548 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022547 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00012400 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015221 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00010508 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012398 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012381 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; intestine; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Sirolimus; multi-walled carbon nanotube; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF713 and Protein of unknown function (DUF713). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53H2.1a | |||||||
| F53H2.1b | |||||||||
| F53H2.1c | |||||||||
| Corresponding_CDS_history | F53H2.1:wp201 | ||||||||
| Corresponding_transcript | F53H2.1a.1 | ||||||||
| F53H2.1b.1 | |||||||||
| F53H2.1c.1 | |||||||||
| Associated_feature | WBsf1003537 | ||||||||
| WBsf1021949 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015546 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070114 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048189 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032719 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017302 | ||||||||
| Expr1152001 | |||||||||
| Expr2004097 | |||||||||
| Expr2022321 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (173) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | F53H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 24.9913 | |||||||
| Reference | WBPaper00030811 | ||||||||
| Method | Gene |
