WormBase Tree Display for Gene: WBGene00010004

WBGene00010004 SMap: S_parent: Sequence: F53H2
  Identity: Version: 1
    Name: Sequence_name: F53H2.1
      Molecular_name: F53H2.1a
        F53H2.1a.1
        CE43551
        F53H2.1b
        CE50728
        F53H2.1c
        CE50789
        F53H2.1b.1
        F53H2.1c.1
      Other_name: CELE_F53H2.1 Accession_evidence: NDB BX284605
      Public_name: F53H2.1
    DB_info: Database: AceView gene 5U859
        WormQTL gene WBGene00010004
        WormFlux gene WBGene00010004
        NDB locus_tag CELE_F53H2.1
        Panther gene CAEEL|WormBase=WBGene00010004|UniProtKB=Q9U3E6
          family PTHR21566
        NCBI gene 186191
        RefSeq protein NM_075528.2
            NM_001313188.1
            NM_001313189.1
        TrEMBL UniProtAcc Q9U3E6
            A0A0K3AS53
            A0A0K3AVM5
        UniProt_GCRP UniProtAcc Q9U3E6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar02105691
      WBVar02105692
      WBVar02105693
      WBVar01877768
      WBVar01499709
      WBVar01877769
      WBVar01877770
      WBVar01877771
      WBVar00229072
      WBVar02124844
      WBVar00229073
      WBVar02124845
      WBVar00229074
      WBVar00072855
      WBVar00072856
      WBVar00072857
      WBVar00072858
      WBVar00490145
      WBVar00490146
      WBVar00490147
      WBVar00490148
      WBVar00490149
      WBVar00490150
      WBVar01754717
      WBVar00490151
      WBVar01914030
      WBVar01754718
      WBVar00490152
      WBVar01754719
      WBVar00490153
      WBVar01914031
      WBVar01754720
      WBVar00490154
      WBVar01914032
      WBVar00490155
      WBVar01754721
      WBVar01914033
      WBVar01754722
      WBVar00490156
      WBVar01914034
      WBVar01754723
      WBVar01914035
      WBVar00490157
      WBVar01754724
      WBVar01914036
      WBVar00490158
      WBVar01914037
      WBVar01754725
      WBVar00490159
      WBVar01914038
      WBVar01754726
      WBVar00490160
      WBVar01754727
      WBVar00490161
      WBVar00490162
      WBVar01754728
      WBVar01754729
      WBVar00490163
      WBVar00490164
      WBVar01754731
      WBVar00490165
      WBVar01754732
      WBVar01754733
      WBVar01754734
      WBVar01496807
      WBVar01754735
      WBVar01754736
      WBVar01754737
      WBVar00261369
      WBVar01106677
      WBVar01106678
      WBVar01106679
      WBVar01106680
      WBVar01106681
      WBVar01106682
      WBVar01106683
      WBVar01106684
      WBVar01106685
      WBVar01106686
      WBVar01106687
      WBVar01106688
      WBVar01106689
      WBVar01106690
      WBVar01106691
      WBVar01106692
      WBVar01106693
      WBVar01106694
      WBVar01106695
      WBVar01106696
      WBVar01106697
      WBVar01106698
      WBVar02122714
      WBVar01106699
      WBVar01106700
      WBVar01106701
      WBVar02122716
      WBVar01106702
      WBVar01106703
      WBVar01106704
      WBVar01106705
      WBVar01106706
      WBVar01106707
      WBVar01106708
      WBVar01106709
      WBVar01106710
      WBVar01106711
      WBVar01106712
      WBVar01106713
      WBVar01106714
      WBVar01106715
      WBVar01106716
      WBVar01496127
      WBVar01106717
      WBVar01106718
      WBVar01106719
      WBVar01106720
      WBVar01106721
      WBVar01106722
      WBVar01499446
      WBVar01106723
      WBVar01500000
      WBVar02026253
      WBVar02026254
      WBVar02026255
      WBVar02074458
      WBVar02026256
      WBVar02026257
      WBVar01526242
      WBVar01526243
      WBVar01526244
      WBVar01526245
      WBVar01526246
      WBVar01526247
      WBVar01466832
      WBVar01526248
      WBVar01466837
      WBVar01526249
      WBVar01678720
      WBVar02138440
      WBVar01498549
      WBVar00105742
      WBVar01499299
      WBVar01900101
      WBVar01498958
      WBVar02124642
      WBVar02124644
    RNASeq_FPKM (74)
    Ortholog (35)
    Paralog: WBGene00015223 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00022549 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00012399 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00022548 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00022547 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00012400 Caenorhabditis elegans From_analysis: Panther
      WBGene00015221 Caenorhabditis elegans From_analysis: Panther
      WBGene00010508 Caenorhabditis elegans From_analysis: Panther
      WBGene00012398 Caenorhabditis elegans From_analysis: Panther
      WBGene00012381 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in ABalaaaala; ABalaapaaa; intestine; and sensory neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Sirolimus; multi-walled carbon nanotube; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF713 and Protein of unknown function (DUF713). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F53H2.1a
      F53H2.1b
      F53H2.1c
    Corresponding_CDS_history: F53H2.1:wp201
    Corresponding_transcript: F53H2.1a.1
      F53H2.1b.1
      F53H2.1c.1
    Associated_feature: WBsf1003537
      WBsf1021949
  Experimental_info: RNAi_result: WBRNAi00015546 Inferred_automatically: RNAi_primary
      WBRNAi00070114 Inferred_automatically: RNAi_primary
      WBRNAi00048189 Inferred_automatically: RNAi_primary
      WBRNAi00032719 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017302
      Expr1152001
      Expr2004097
      Expr2022321
    Microarray_results (16)
    Expression_cluster (173)
    Interaction (15)
  Map_info: Positive: Positive_clone: F53H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 24.9913
  Reference: WBPaper00030811
  Method: Gene