WormBase Tree Display for Gene: WBGene00004144

WBGene00004144 SMap: S_parent: Sequence: R11G11
  Identity: Version: 2
    Name: CGC_name: srlf-35 Person_evidence: WBPerson260
      Sequence_name: R11G11.7
      Molecular_name: R11G11.7
        R11G11.7.1
        CE12752
      Other_name: pqn-60 Person_evidence: WBPerson260
        CELE_R11G11.7 Accession_evidence: NDB BX284605
      Public_name: srlf-35
    DB_info: Database: AceView gene 5A979
        WormQTL gene WBGene00004144
        WormFlux gene WBGene00004144
        NDB locus_tag CELE_R11G11.7
        Panther gene CAEEL|WormBase=WBGene00004144|UniProtKB=O16948
          family PTHR21593
        NCBI gene 187826
        RefSeq protein NM_070824.2
        TREEFAM TREEFAM_ID TF316074
        TrEMBL UniProtAcc O16948
        UniProt_GCRP UniProtAcc O16948
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 02 Mar 2022 23:57:00 WBPerson51134 Name_change: CGC_name: srlf-35
                Other_name: pqn-60
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srlf
    Allele (39)
    RNASeq_FPKM (74)
    GO_annotation: 00029013
      00029014
    Ortholog (27)
    Paralog (39)
    Structured_description: Concise_description: pqn-60 encodes a 154-residue, glutamine/asparagine (Q/N)-rich('prion'-like) protein, predicted to have coiled-coil structure, withmany paralogs in nematodes but no obvious non-nematode orthologs; PQN-60inhibits CEP-1- and HUS-1-dependent germline apoptosis, as do BMK-1,RAD-50, and RAD-51. Paper_evidence: WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
            WBPaper00023909
          Curator_confirmed: WBPerson567
          Date_last_updated: 21 Apr 2007 00:00:00
      Automated_description: Enriched in ABaraapapaa; ABaraapppaa; arcade cell; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R11G11.7
    Corresponding_transcript: R11G11.7.1
    Associated_feature: WBsf979050
      WBsf231344
      WBsf231345
  Experimental_info: RNAi_result: WBRNAi00064188 Inferred_automatically: RNAi_primary
      WBRNAi00051817 Inferred_automatically: RNAi_primary
      WBRNAi00064214 Inferred_automatically: RNAi_primary
      WBRNAi00034873 Inferred_automatically: RNAi_primary
      WBRNAi00017776 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014988
      Expr1155477
      Expr2015061
      Expr2033296
    Drives_construct: WBCnstr00035672
    Construct_product: WBCnstr00035672
    Microarray_results (14)
    Expression_cluster (214)
    Interaction (25)
  Map_info: Map: V Position: -19.9855
    Positive: Positive_clone: R11G11 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene