WormBase Tree Display for Gene: WBGene00007132

WBGene00007132 SMap: S_parent: Sequence: B0284
  Identity: Version: 2
    Name: CGC_name: pals-27 Person_evidence: WBPerson260
      Sequence_name: B0284.2
      Molecular_name: B0284.2
        WP:CE00651
        CE00651
        B0284.2.1
      Other_name: CELE_B0284.2 Accession_evidence: NDB BX284603
      Public_name: pals-27
    DB_info: Database: AceView gene 3F473
        WormQTL gene WBGene00007132
        WormFlux gene WBGene00007132
        NDB locus_tag CELE_B0284.2
        NCBI gene 175567
        RefSeq mRNA NM_065483.5
          protein NP_497884.1
            NM_065483.8
        TREEFAM TREEFAM_ID TF322628
        UniProt UniProtAcc Q17469
        TrEMBL UniProtAcc Q17469
        UniProt_GCRP UniProtAcc Q17469
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog: WBGene00028845 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g3004 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g3005 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g1855 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g18005 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g18455 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00680.g14347 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_019033 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30075900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7436 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007131 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00007134 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007657 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007659 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007660 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012505 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABplapaaap; excretory cell; head mesodermal cell; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including Sodium Chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0284.2
    Corresponding_transcript: B0284.2.1
    Associated_feature: WBsf992106
      WBsf992107
      WBsf224725
  Experimental_info: RNAi_result: WBRNAi00002068 Inferred_automatically: RNAi_primary
      WBRNAi00005126 Inferred_automatically: RNAi_primary
      WBRNAi00038865 Inferred_automatically: RNAi_primary
      WBRNAi00115944 Inferred_automatically: RNAi_primary
      WBRNAi00009662 Inferred_automatically: RNAi_primary
      WBRNAi00070091 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1143056
      Expr2014700
      Expr2032935
    Microarray_results (14)
    Expression_cluster (241)
    Interaction: WBInteraction000288925
      WBInteraction000342580
  Map_info: Map: III Position: -3.1784
    Positive: Positive_clone: B0284 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061319
    WBPaper00062345
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene