WormBase Tree Display for Gene: WBGene00021625
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| WBGene00021625 | SMap | S_parent | Sequence | Y47D7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47D7A.13 | |||||||
| Molecular_name | Y47D7A.13 | ||||||||
| Y47D7A.13.1 | |||||||||
| CE22060 | |||||||||
| Other_name | Y47D7A.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y47D7A.13 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y47D7A.13 | ||||||||
| DB_info | Database | AceView | gene | 5E914 | |||||
| WormQTL | gene | WBGene00021625 | |||||||
| WormFlux | gene | WBGene00021625 | |||||||
| NDB | locus_tag | CELE_Y47D7A.13 | |||||||
| NCBI | gene | 178841 | |||||||
| RefSeq | protein | NM_071825.7 | |||||||
| TrEMBL | UniProtAcc | Q9N3U2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3U2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in DA neuron; VA neuron; intestine; neurons; and seam cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by forty chemicals including hydrogen sulfide; Nitric Oxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D7A.13 | |||||||
| Corresponding_transcript | Y47D7A.13.1 | ||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf652575 | ||||||||
| WBsf652576 | |||||||||
| WBsf668884 | |||||||||
| WBsf233584 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020711 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116263 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084278 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056780 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015829 | ||||||||
| Expr1039458 | |||||||||
| Expr1160236 | |||||||||
| Expr2007614 | |||||||||
| Expr2025851 | |||||||||
| Drives_construct | WBCnstr00024471 | ||||||||
| Construct_product | WBCnstr00024471 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (350) | |||||||||
| Map_info | Positive | Positive_clone | Y47D7A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -5.36669 | |||||||
| Reference | WBPaper00059378 | ||||||||
| Method | Gene |
