WormBase Tree Display for Gene: WBGene00016677
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| WBGene00016677 | SMap | S_parent | Sequence | C45G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C45G9.6 | |||||||
| Molecular_name | C45G9.6a | ||||||||
| C45G9.6a.1 | |||||||||
| CE54095 | |||||||||
| C45G9.6b | |||||||||
| CE30634 | |||||||||
| C45G9.6b.1 | |||||||||
| Other_name | CELE_C45G9.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C45G9.6 | ||||||||
| DB_info | Database | AceView | gene | 3G129 | |||||
| WormQTL | gene | WBGene00016677 | |||||||
| WormFlux | gene | WBGene00016677 | |||||||
| NDB | locus_tag | CELE_C45G9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016677|UniProtKB=Q09279 | |||||||
| family | PTHR33459 | ||||||||
| NCBI | gene | 175684 | |||||||
| RefSeq | protein | NM_001379695.2 | |||||||
| NM_171111.8 | |||||||||
| SwissProt | UniProtAcc | Q09279 | |||||||
| UniProt_GCRP | UniProtAcc | Q09279 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplppppaa; ABprppppaa; ALN; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; mianserin; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C45G9.6a | |||||||
| C45G9.6b | |||||||||
| Corresponding_CDS_history | C45G9.6a:wp275 | ||||||||
| Corresponding_transcript | C45G9.6a.1 | ||||||||
| C45G9.6b.1 | |||||||||
| Other_sequence | CSC00582_1 | ||||||||
| FD514618.1 | |||||||||
| Associated_feature | WBsf645141 | ||||||||
| WBsf658881 | |||||||||
| WBsf658882 | |||||||||
| WBsf992275 | |||||||||
| WBsf992276 | |||||||||
| WBsf224850 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000803 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042555 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005540 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024406 | ||||||||
| Expr1037167 | |||||||||
| Expr1146538 | |||||||||
| Expr2001664 | |||||||||
| Expr2019891 | |||||||||
| Drives_construct | WBCnstr00027896 | ||||||||
| Construct_product | WBCnstr00027896 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction | WBInteraction000032461 | ||||||||
| WBInteraction000208610 | |||||||||
| WBInteraction000221009 | |||||||||
| WBInteraction000267702 | |||||||||
| Map_info | Positive | Positive_clone | C45G9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -2.2086 | |||||||
| Method | Gene |
