WormBase Tree Display for Gene: WBGene00008915
expand all nodes | collapse all nodes | view schema
| WBGene00008915 | SMap | S_parent | Sequence | F17C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F17C11.4 | |||||||
| Molecular_name | F17C11.4a | ||||||||
| F17C11.4a.1 | |||||||||
| CE05651 | |||||||||
| F17C11.4b | |||||||||
| CE48364 | |||||||||
| F17C11.4b.1 | |||||||||
| Other_name | CELE_F17C11.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F17C11.4 | ||||||||
| DB_info | Database | AceView | gene | 5L433 | |||||
| WormQTL | gene | WBGene00008915 | |||||||
| WormFlux | gene | WBGene00008915 | |||||||
| NDB | locus_tag | CELE_F17C11.4 | |||||||
| NCBI | gene | 179518 | |||||||
| RefSeq | protein | NM_001307764.3 | |||||||
| NM_001392605.1 | |||||||||
| TrEMBL | UniProtAcc | N1NVB6 | |||||||
| Q19515 | |||||||||
| UniProt_GCRP | UniProtAcc | N1NVB6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including GLR; MSpppaaa; coelomocyte; head mesodermal cell; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including D-glucose; tert-Butylhydroperoxide; and Psoralens based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17C11.4a | |||||||
| F17C11.4b | |||||||||
| Corresponding_transcript | F17C11.4a.1 | ||||||||
| F17C11.4b.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf647218 | ||||||||
| WBsf661670 | |||||||||
| WBsf981996 | |||||||||
| WBsf232441 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044876 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031066 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026335 | ||||||||
| Expr1033879 | |||||||||
| Expr1148842 | |||||||||
| Expr2002688 | |||||||||
| Expr2020904 | |||||||||
| Drives_construct | WBCnstr00032598 | ||||||||
| Construct_product | WBCnstr00032598 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (177) | |||||||||
| SAGE_tag | SAGE:aaatgcagac | Strand | Antisense | ||||||
| SAGE:aaagcagcag | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgactggtgt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgactggtgtcaaggtt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaagcagcagtcgaaat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (95) | |||||||||
| Map_info | Positive | Positive_clone | F17C11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 2.8389 | |||||||
| Method | Gene |
