WormBase Tree Display for Gene: WBGene00010001
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| WBGene00010001 | SMap | S_parent | Sequence | F53F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F53F8.4 | |||||||
| Molecular_name | F53F8.4 | ||||||||
| F53F8.4.1 | |||||||||
| CE17858 | |||||||||
| Other_name | CELE_F53F8.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F53F8.4 | ||||||||
| DB_info | Database | AceView | gene | 5V160 | |||||
| WormQTL | gene | WBGene00010001 | |||||||
| WormFlux | gene | WBGene00010001 | |||||||
| NDB | locus_tag | CELE_F53F8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010001|UniProtKB=O62261 | |||||||
| family | PTHR46705 | ||||||||
| NCBI | gene | 186181 | |||||||
| RefSeq | protein | NM_075596.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315483 | |||||||
| TrEMBL | UniProtAcc | O62261 | |||||||
| UniProt_GCRP | UniProtAcc | O62261 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplapaaapa; ABprapaaapa; AIZ; germline precursor cell; and intestine based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module; Phosphorylation site; and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53F8.4 | |||||||
| Corresponding_transcript | F53F8.4.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf716616 | ||||||||
| WBsf1003617 | |||||||||
| WBsf1021996 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032708 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048163 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021866 | ||||||||
| Expr1151975 | |||||||||
| Expr2004085 | |||||||||
| Expr2022309 | |||||||||
| Drives_construct | WBCnstr00031749 | ||||||||
| Construct_product | WBCnstr00031749 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction | WBInteraction000566130 | ||||||||
| WBInteraction000576172 | |||||||||
| WBInteraction000580682 | |||||||||
| Map_info | Positive | Positive_clone | F53F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 25.0352 | |||||||
| Method | Gene |
