WormBase Tree Display for Gene: WBGene00010661
expand all nodes | collapse all nodes | view schema
| WBGene00010661 | SMap | S_parent | Sequence | K08E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tyr-2 | Person_evidence | WBPerson69 | |||||
| Sequence_name | K08E3.1 | ||||||||
| Molecular_name | K08E3.1 | ||||||||
| K08E3.1.1 | |||||||||
| CE18864 | |||||||||
| Other_name | CELE_K08E3.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tyr-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Feb 2005 11:34:52 | WBPerson2970 | Name_change | CGC_name | tyr-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tyr | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00031972 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102039 | ||||||||
| 00102040 | |||||||||
| 00102041 | |||||||||
| 00118004 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015332 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021553 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enables dopachrome isomerase activity. Involved in negative regulation of apoptotic process. Expressed in hypodermis and uterine muscle. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human TYR (tyrosinase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
| DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||||
| DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709) | ||||||
| DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||||
| Molecular_info | Corresponding_CDS | K08E3.1 | |||||||
| Corresponding_transcript | K08E3.1.1 | ||||||||
| Other_sequence (32) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000756 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005997 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098200 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034132 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016804 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107782 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9119 | ||||||||
| Expr1026237 | |||||||||
| Expr1034659 | |||||||||
| Expr1153982 | |||||||||
| Expr2017686 | |||||||||
| Expr2035824 | |||||||||
| Drives_construct | WBCnstr00006917 | ||||||||
| WBCnstr00006918 | |||||||||
| WBCnstr00006921 | |||||||||
| WBCnstr00006926 | |||||||||
| WBCnstr00006975 | |||||||||
| WBCnstr00006976 | |||||||||
| WBCnstr00006977 | |||||||||
| WBCnstr00031245 | |||||||||
| Construct_product | WBCnstr00006919 | ||||||||
| WBCnstr00006920 | |||||||||
| WBCnstr00006921 | |||||||||
| WBCnstr00006922 | |||||||||
| WBCnstr00006923 | |||||||||
| WBCnstr00006925 | |||||||||
| WBCnstr00006926 | |||||||||
| WBCnstr00031245 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (267) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | III | Position | 21.4473 | Error | 0.01737 | |||
| Positive | Positive_clone | K08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5064 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00011697 | ||||||||
| WBPaper00022302 | |||||||||
| WBPaper00036343 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044177 | |||||||||
| WBPaper00053133 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
