WormBase Tree Display for Gene: WBGene00016419
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| WBGene00016419 | SMap | S_parent | Sequence | C34G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tyr-4 | Person_evidence | WBPerson69 | |||||
| Sequence_name | C34G6.2 | ||||||||
| Molecular_name | C34G6.2 | ||||||||
| C34G6.2.1 | |||||||||
| CE08574 | |||||||||
| Other_name | CELE_C34G6.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tyr-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Feb 2005 11:34:52 | WBPerson2970 | Name_change | CGC_name | tyr-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tyr | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00031924 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024775 | ||||||||
| 00122059 | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015332 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021553 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase); TYR (tyrosinase); and TYRP1 (tyrosinase related protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
| DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||||
| DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709) | ||||||
| DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||||
| Molecular_info | Corresponding_CDS | C34G6.2 | |||||||
| Corresponding_transcript | C34G6.2.1 | ||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf656345 | ||||||||
| WBsf217724 | |||||||||
| WBsf217725 | |||||||||
| WBsf217726 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00098215 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029552 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003081 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098219 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001841 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041928 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010270 | ||||||||
| Expr1037037 | |||||||||
| Expr1145935 | |||||||||
| Expr2017688 | |||||||||
| Expr2035826 | |||||||||
| Drives_construct | WBCnstr00028083 | ||||||||
| Construct_product | WBCnstr00028083 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (185) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | I | Position | 0.475289 | Error | 0.001229 | |||
| Positive | Positive_clone | C34G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5068 | |||||||
| 4575 | |||||||||
| 4601 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00044177 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
