WormBase Tree Display for Gene: WBGene00021553
expand all nodes | collapse all nodes | view schema
| WBGene00021553 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tyr-5 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y44E3B.2 | ||||||||
| Molecular_name | Y44E3B.2 | ||||||||
| Y44E3B.2.1 | |||||||||
| CE39838 | |||||||||
| Other_name | CELE_Y44E3B.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | tyr-5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Jan 2010 16:20:10 | WBPerson2970 | Name_change | CGC_name | tyr-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tyr | ||||||||
| Allele (74) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038649 | ||||||||
| 00125882 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015332 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human TYR (tyrosinase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
| DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||||
| DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||||
| DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||||
| DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||||
| Molecular_info | Corresponding_CDS | Y44E3B.2 | |||||||
| Corresponding_CDS_history | Y44E3B.2:wp154 | ||||||||
| Corresponding_transcript | Y44E3B.2.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf983096 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00112664 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056562 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004620 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020061 | ||||||||
| Expr1160035 | |||||||||
| Expr2017689 | |||||||||
| Expr2035827 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | I | Position | -4.25528 | Error | 0.043092 | |||
| Positive | Positive_clone | Y44E3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064934 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
