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WormBase Tree Display for Gene: WBGene00010661

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Name Class

WBGene00010661SMapS_parentSequenceK08E3
IdentityVersion2
NameCGC_nametyr-2Person_evidenceWBPerson69
Sequence_nameK08E3.1
Molecular_nameK08E3.1
K08E3.1.1
CE18864
Other_nameCELE_K08E3.1Accession_evidenceNDBBX284603
Public_nametyr-2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
211 Feb 2005 11:34:52WBPerson2970Name_changeCGC_nametyr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtyr
Allele (47)
StrainWBStrain00031972
RNASeq_FPKM (74)
GO_annotation00102039
00102040
00102041
00118004
OrthologWBGene00055858Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00037728Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00152570Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122385Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00114146Pristionchus pacificusFrom_analysisOMA
CSP26.g14470Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13717Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3640Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g3641Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g4916Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g10974Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3500Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g13194Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-tyr-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7249Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00711.g14662Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11497Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010366Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30107100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g9410Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291396Trichuris murisFrom_analysisWormBase-Compara
WBGene00296088Trichuris murisFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-991026-3Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-000508-1Danio rerioFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040718-249Danio rerioFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070718-2Danio rerioFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:2709Homo sapiensFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:12442Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:12450Homo sapiensFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:98880Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:98881Mus musculusFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1593266Rattus norvegicusFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1589755Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ParalogWBGene00009001Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010060Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015332Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021553Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016419Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022231Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017483Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnables dopachrome isomerase activity. Involved in negative regulation of apoptotic process. Expressed in hypodermis and uterine muscle. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human TYR (tyrosinase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050633Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:8465Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070097Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12450)
DOID:8923Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0050632Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709)
DOID:12306Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070095Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:0070094Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:1909Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442)
DOID:10123Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450)
Molecular_infoCorresponding_CDSK08E3.1
Corresponding_transcriptK08E3.1.1
Other_sequence (32)
Associated_feature (15)
Experimental_infoRNAi_resultWBRNAi00000756Inferred_automaticallyRNAi_primary
WBRNAi00005997Inferred_automaticallyRNAi_primary
WBRNAi00050281Inferred_automaticallyRNAi_primary
WBRNAi00098200Inferred_automaticallyRNAi_primary
WBRNAi00034132Inferred_automaticallyRNAi_primary
WBRNAi00016804Inferred_automaticallyRNAi_primary
WBRNAi00107781Inferred_automaticallyRNAi_primary
WBRNAi00107782Inferred_automaticallyRNAi_primary
Expr_patternExpr9119
Expr1026237
Expr1034659
Expr1153982
Expr2017686
Expr2035824
Drives_constructWBCnstr00006917
WBCnstr00006918
WBCnstr00006921
WBCnstr00006926
WBCnstr00006975
WBCnstr00006976
WBCnstr00006977
WBCnstr00031245
Construct_productWBCnstr00006919
WBCnstr00006920
WBCnstr00006921
WBCnstr00006922
WBCnstr00006923
WBCnstr00006925
WBCnstr00006926
WBCnstr00031245
Microarray_results (19)
Expression_cluster (267)
Interaction (13)
Map_infoMapIIIPosition21.4473Error0.01737
PositivePositive_cloneK08E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5064
Pseudo_map_position
ReferenceWBPaper00011697
WBPaper00022302
WBPaper00036343
WBPaper00038491
WBPaper00044177
WBPaper00053133
WBPaper00055090
WBPaper00065140
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene