WormBase Tree Display for Gene: WBGene00000012

WBGene00000012 SMap: S_parent: Sequence: C50F2
  Identity: Version: 1
    Name: CGC_name: abf-1
      Sequence_name: C50F2.9
      Molecular_name: C50F2.9
        C50F2.9.1
        CE27879
      Other_name: CELE_C50F2.9 Accession_evidence: NDB BX284601
      Public_name: abf-1
    DB_info: Database: AceView gene 1E454
        WormQTL gene WBGene00000012
        WormFlux gene WBGene00000012
        NDB locus_tag CELE_C50F2.9
        Panther gene CAEEL|WormBase=WBGene00000012|UniProtKB=G5EGC4
          family PTHR37971
        NCBI gene 266827
        RefSeq protein NM_058852.7
        SwissProt UniProtAcc G5EGC4
        TREEFAM TREEFAM_ID TF322860
        UniProt_GCRP UniProtAcc G5EGC4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:19 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: abf
    Allele (16)
    RNASeq_FPKM (74)
    GO_annotation: 00019934
      00019935
      00106541
    Contained_in_operon: CEOP1951
    Ortholog (12)
    Paralog: WBGene00000013 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: The abf-1 gene encodes a homolog of the antibacterial factor ASABF from Ascaris suum; it is closely related to abf-2. Paper_evidence: WBPaper00005130
            WBPaper00013575
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be involved in defense response to other organism. Predicted to be located in extracellular region. Expressed in body wall musculature; intestine; neurons; and pharynx. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C50F2.9
    Corresponding_transcript: C50F2.9.1
    Other_sequence: AS08547
      AS08543
    Associated_feature: WBsf219200
  Experimental_info: RNAi_result: WBRNAi00042934 Inferred_automatically: RNAi_primary
      WBRNAi00001904 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1810
      Expr1811
      Expr4720
      Expr1016927
      Expr1146903
      Expr2009079
      Expr2027315
    Drives_construct: WBCnstr00010466
      WBCnstr00012197
      WBCnstr00015898
      WBCnstr00037799
    Construct_product: WBCnstr00012197
      WBCnstr00037799
    Microarray_results (15)
    Expression_cluster (57)
    Interaction: WBInteraction000135489
      WBInteraction000503784
      WBInteraction000503915
      WBInteraction000524361
    WBProcess: WBbiopr:00000039
  Map_info: Map: I Position: -1.93912 Error: 0.003252
    Positive: Positive_clone: C50F2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (16)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene