WormBase Tree Display for Gene: WBGene00003722
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| WBGene00003722 | SMap | S_parent | Sequence | R11G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-132 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R11G11.1 | ||||||||
| Molecular_name | R11G11.1 | ||||||||
| R11G11.1.1 | |||||||||
| CE12740 | |||||||||
| Other_name | CELE_R11G11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-132 | ||||||||
| DB_info | Database | AceView | gene | 5B13 | |||||
| WormQTL | gene | WBGene00003722 | |||||||
| WormFlux | gene | WBGene00003722 | |||||||
| NDB | locus_tag | CELE_R11G11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003722|UniProtKB=O16961 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 187822 | |||||||
| RefSeq | protein | NM_001392467.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315604 | |||||||
| TrEMBL | UniProtAcc | O16961 | |||||||
| UniProt_GCRP | UniProtAcc | O16961 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (185) | |||||||||
| Strain | WBStrain00035265 | ||||||||
| WBStrain00035266 | |||||||||
| WBStrain00035267 | |||||||||
| WBStrain00036358 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029036 | ||||||||
| 00029037 | |||||||||
| 00029038 | |||||||||
| 00111685 | |||||||||
| 00111686 | |||||||||
| 00111687 | |||||||||
| 00111688 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in excretory cell and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11G11.1 | |||||||
| Corresponding_CDS_history | R11G11.1:wp93 | ||||||||
| R11G11.1:wp188 | |||||||||
| Corresponding_transcript | R11G11.1.1 | ||||||||
| Other_sequence | CR04533 | ||||||||
| Associated_feature | WBsf646639 | ||||||||
| WBsf981882 | |||||||||
| WBsf231347 | |||||||||
| Transcription_factor | WBTranscriptionFactor000262 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017764 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115850 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034868 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051806 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00001056 | ||||||||
| WBCnstr00001088 | |||||||||
| WBCnstr00001089 | |||||||||
| WBCnstr00012516 | |||||||||
| WBCnstr00012783 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (130) | |||||||||
| Map_info | Map | V | Position | -19.98 | |||||
| Positive | Positive_clone | R11G11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5351 | |||||||
| 5368 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006465 | ||||||||
| WBPaper00026592 | |||||||||
| WBPaper00027309 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
