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WormBase Tree Display for Gene: WBGene00006650

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Name Class

WBGene00006650EvidencePaper_evidenceWBPaper00004805
SMapS_parentSequenceF09E10
IdentityVersion1
NameCGC_nametts-1Person_evidenceWBPerson521
Sequence_nameF09E10.11
Molecular_nameF09E10.11a
F09E10.11b
Other_nameCELE_F09E10.11Accession_evidenceNDBBX284606
Public_nametts-1
DB_infoDatabaseNDBlocus_tagCELE_F09E10.11
NCBIgene180490
RefSeqproteinNR_001529.1
NR_001528.1
RNAcentralURSidURS000025444A
URS00004A22C7
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001263
Gene_classtts
Allele (19)
StrainWBStrain00035509
WBStrain00055041
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in muscle cell and somatic gonad precursor based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; Nitric Oxide; and methylmercury hydroxide based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF09E10.11a
F09E10.11b
Associated_featureWBsf653707
Experimental_infoRNAi_resultWBRNAi00007488Inferred_automaticallyRNAi_primary
Construct_productWBCnstr00020135
Microarray_results174073_at
A_12_P143515
GPL21109_F09E10.11a
Expression_cluster (251)
InteractionWBInteraction000005588
WBInteraction000524957
WBInteraction000541241
WBProcessWBbiopr:00000001
Map_infoMapXPosition-18.034Error0.020992
PositivePositive_cloneF09E10Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4744
5069
Pseudo_map_position
ReferenceWBPaper00004805
WBPaper00010042
WBPaper00017820
WBPaper00018812
WBPaper00025088
WBPaper00027286
WBPaper00027722
WBPaper00046337
WBPaper00059048
WBPaper00064543
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene