WormBase Tree Display for Gene: WBGene00008616

WBGene00008616 SMap: S_parent: Sequence: F09C6
  Identity: Version: 2
    Name: CGC_name: fbxa-44 Person_evidence: WBPerson655
      Sequence_name: F09C6.2
      Molecular_name: F09C6.2
        F09C6.2.1
        CE38321
      Other_name: CELE_F09C6.2 Accession_evidence: NDB BX284605
      Public_name: fbxa-44
    DB_info: Database: AceView gene 5R373
        WormQTL gene WBGene00008616
        WormFlux gene WBGene00008616
        NDB locus_tag CELE_F09C6.2
        Panther gene CAEEL|WormBase=WBGene00008616|UniProtKB=O45329
          family PTHR23015
        NCBI gene 184231
        RefSeq protein NM_074866.3
        TREEFAM TREEFAM_ID TF322360
        TrEMBL UniProtAcc O45329
        UniProt_GCRP UniProtAcc O45329
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-44
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (83)
    RNASeq_FPKM (74)
    Ortholog (18)
    Paralog (222)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in pharyngeal muscle cell based on tiling array studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on RNA-seq; tiling array; and microarray studies. Is affected by nine chemicals including methylmercuric chloride; multi-walled carbon nanotube; and tert-Butylhydroperoxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09C6.2
    Corresponding_CDS_history: F09C6.2:wp141
    Corresponding_transcript: F09C6.2.1
  Experimental_info: RNAi_result: WBRNAi00012959 Inferred_automatically: RNAi_primary
      WBRNAi00044097 Inferred_automatically: RNAi_primary
      WBRNAi00030698 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016275
      Expr1148069
      Expr2011547
      Expr2029784
    Drives_construct: WBCnstr00032826
    Construct_product: WBCnstr00032826
    Microarray_results (12)
    Expression_cluster (89)
    Interaction: WBInteraction000280154
  Map_info: Map: V Position: 11.2619 Error: 0.003005
    Positive: Positive_clone: F09C6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene