WormBase Tree Display for Gene: WBGene00020242
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| WBGene00020242 | SMap | S_parent | Sequence | T05B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phat-5 | Person_evidence | WBPerson980 | |||||
| WBPerson3905 | |||||||||
| Sequence_name | T05B4.11 | ||||||||
| Molecular_name | T05B4.11 | ||||||||
| T05B4.11.1 | |||||||||
| CE13213 | |||||||||
| Other_name | CELE_T05B4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | phat-5 | ||||||||
| DB_info | Database | AceView | gene | 5E600 | |||||
| WormQTL | gene | WBGene00020242 | |||||||
| WormFlux | gene | WBGene00020242 | |||||||
| NDB | locus_tag | CELE_T05B4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020242|UniProtKB=O16420 | |||||||
| family | PTHR21724 | ||||||||
| NCBI | gene | 178811 | |||||||
| RefSeq | protein | NM_071747.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317956 | |||||||
| TrEMBL | UniProtAcc | O16420 | |||||||
| UniProt_GCRP | UniProtAcc | O16420 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Feb 2006 09:28:57 | WBPerson2970 | Name_change | CGC_name | phat-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phat | ||||||||
| Allele (68) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028012 | ||||||||
| Ortholog (13) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. Expressed in g1AL and g1AR. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05B4.11 | |||||||
| Corresponding_transcript | T05B4.11.1 | ||||||||
| Associated_feature | WBsf047526 | ||||||||
| WBsf652559 | |||||||||
| WBsf668854 | |||||||||
| WBsf668855 | |||||||||
| WBsf999731 | |||||||||
| WBsf999732 | |||||||||
| WBsf233556 | |||||||||
| WBsf233557 | |||||||||
| WBsf233558 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052467 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035179 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8576 | ||||||||
| Expr10167 | |||||||||
| Expr1014688 | |||||||||
| Expr1038812 | |||||||||
| Expr1156092 | |||||||||
| Expr2014886 | |||||||||
| Expr2033121 | |||||||||
| Drives_construct | WBCnstr00017921 | ||||||||
| WBCnstr00025273 | |||||||||
| WBCnstr00041741 | |||||||||
| WBCnstr00041747 | |||||||||
| Construct_product | WBCnstr00013374 | ||||||||
| WBCnstr00025273 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (188) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | V | Position | -6.46656 | |||||
| Positive | Positive_clone | T05B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032277 | ||||||||
| WBPaper00041256 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
