WormBase Tree Display for Gene: WBGene00004821

WBGene00004821 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: F54D10
  Identity: Version: 1
    Name: CGC_name: skr-15 Person_evidence: WBPerson322
      Sequence_name: F54D10.1
      Molecular_name: F54D10.1
        F54D10.1.1
        CE19451
      Other_name: CELE_F54D10.1 Accession_evidence: NDB BX284602
      Public_name: skr-15
    DB_info: Database: AceView gene 2E115
        WormQTL gene WBGene00004821
        WormFlux gene WBGene00004821
        NDB locus_tag CELE_F54D10.1
        Panther gene CAEEL|WormBase=WBGene00004821|UniProtKB=G5EE88
          family PTHR11165
        NCBI gene 173729
        RefSeq protein NM_062261.7
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc G5EE88
        UniProt_GCRP UniProtAcc G5EE88
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (16)
    Strain: WBStrain00055478
    RNASeq_FPKM (74)
    GO_annotation: 00015641
      00015642
      00015643
      00015644
      00015645
      00113227
    Ortholog (94)
    Paralog (20)
    Structured_description: Concise_description: The skr-15 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-15(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D10.1
    Corresponding_transcript: F54D10.1.1
    Other_sequence: CBC05817_1
    Associated_feature: WBsf644085
      WBsf221052
      WBsf221053
  Experimental_info: RNAi_result: WBRNAi00086805 Inferred_automatically: RNAi_primary
      WBRNAi00064131 Inferred_automatically: RNAi_primary
      WBRNAi00069093 Inferred_automatically: RNAi_primary
      WBRNAi00048285 Inferred_automatically: RNAi_primary
      WBRNAi00098054 Inferred_automatically: RNAi_primary
      WBRNAi00094810 Inferred_automatically: RNAi_primary
      WBRNAi00032773 Inferred_automatically: RNAi_primary
      WBRNAi00098129 Inferred_automatically: RNAi_primary
      WBRNAi00015598 Inferred_automatically: RNAi_primary
      WBRNAi00086794 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017675
      Expr1032396
      Expr1152086
      Expr2015842
      Expr2034075
    Drives_construct: WBCnstr00035363
    Construct_product: WBCnstr00035363
    Microarray_results (17)
    Expression_cluster (189)
    Interaction (186)
  Map_info: Map: II Position: -6.20931 Error: 0.000263
    Positive: Positive_clone: F54D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005736
    WBPaper00029151
    WBPaper00029221
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene