WormBase Tree Display for Gene: WBGene00021741
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| WBGene00021741 | SMap | S_parent | Sequence | Y50D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y50D4B.2 | |||||||
| Molecular_name | Y50D4B.2a | ||||||||
| Y50D4B.2a.1 | |||||||||
| CE24401 | |||||||||
| Y50D4B.2b | |||||||||
| CE50927 | |||||||||
| Y50D4B.2b.1 | |||||||||
| Y50D4B.2c | |||||||||
| Other_name | Y50D4B.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D4B.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y50D4B.2 | ||||||||
| DB_info | Database | AceView | gene | 5B579 | |||||
| WormQTL | gene | WBGene00021741 | |||||||
| WormFlux | gene | WBGene00021741 | |||||||
| NDB | locus_tag | CELE_Y50D4B.2 | |||||||
| Panther | gene | CAEEL|WormBase=Y50D4B.2b|UniProtKB=A0A0K3AVC7 | |||||||
| family | PTHR12286 | ||||||||
| NCBI | gene | 190094 | |||||||
| RefSeq | protein | NR_132497.1 | |||||||
| NM_001313337.3 | |||||||||
| NM_070978.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AVC7 | |||||||
| Q9N4S9 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AVC7 | |||||||
| RNAcentral | URSid | URS000083DC10 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (134) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001410 | ||||||||
| 00001411 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00017719 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00017720 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in glycolipid biosynthetic process. Predicted to be located in lipid droplet. Is an ortholog of human SCCPDH (saccharopine dehydrogenase (putative)). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4B.2a | |||||||
| Y50D4B.2b | |||||||||
| Corresponding_CDS_history | Y50D4B.2:wp88 | ||||||||
| Y50D4B.2:wp110 | |||||||||
| Corresponding_transcript | Y50D4B.2c | ||||||||
| Y50D4B.2a.1 | |||||||||
| Y50D4B.2b.1 | |||||||||
| Other_sequence | HC04482 | ||||||||
| ES742029.1 | |||||||||
| HCC09535_1 | |||||||||
| Dviv_isotig02081 | |||||||||
| Associated_feature | WBsf231382 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037324 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057071 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025695 | ||||||||
| Expr1039529 | |||||||||
| Expr1160518 | |||||||||
| Expr2007745 | |||||||||
| Expr2025988 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000365208 | ||||||||
| WBInteraction000408267 | |||||||||
| WBInteraction000408268 | |||||||||
| Map_info | Positive | Positive_clone | Y50D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.8531 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
